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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
98 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180782398
ODIQ01000003
157146
Bacteroidota
TAC
Val
>WENV180782399
ODIQ01000003
157146
Bacteroidota
TAC
Val
>WENV180782436
ODIQ01000013
118221
Bacteroidota
CAA
Leu
>WENV180782526
ODIQ01000033
404663
Bacteroidota
GGT
Thr
>WENV180782525
ODIQ01000033
175886
Bacteroidota
GGC
Ala
>WENV180782563
ODIQ01000047
284456
Bacteroidota
CGG
Pro
>WENV180782581
ODIQ01000051
178571
Bacteroidota
GTT
Asn
>WENV180782580
ODIQ01000051
178571
Bacteroidota
GTT
Asn
>WENV180782594
ODIQ01000063
179653
Bacteroidota
GTG
His
>WENV180782598
ODIQ01000065
20533
Bacteroidota
GGA
Ser
>WENV180782599
ODIQ01000066
46648
Bacteroidota
TAA
Leu
>WENV180782601
ODIQ01000066
284456
Bacteroidota
CGG
Pro
>WENV180782603
ODIQ01000067
282852
Bacteroidota
TTT
Lys
>WENV180782614
ODIQ01000075
156422
Bacteroidota
TAC
Val
>WENV180782619
ODIQ01000079
156068
Bacteroidota
TAC
Val
>WENV180782620
ODIQ01000079
156068
Bacteroidota
TAC
Val
>WENV180782621
ODIQ01000079
156068
Bacteroidota
TAC
Val
>WENV180782629
ODIQ01000083
280478
Bacteroidota
GCC
Gly
>WENV180782651
ODIQ01000093
482909
Bacteroidota
TTG
Gln
>WENV180782654
ODIQ01000093
101147
Bacteroidota
CAG
Leu
>WENV180782658
ODIQ01000094
284457
Bacteroidota
CAT
Met
>WENV180782671
ODIQ01000104
156422
Bacteroidota
TAC
Val
>WENV180782696
ODIQ01000115
481328
Bacteroidota
TTG
Gln
>WENV180782702
ODIQ01000120
285750
Bacteroidota
CCC
Gly
>WENV180782710
ODIQ01000127
178572
Bacteroidota
CAT
Met
>WENV180782734
ODIQ01000131
156383
Bacteroidota
GGG
Pro
>WENV180782735
ODIQ01000132
156383
Bacteroidota
GGG
Pro
>WENV180782757
ODIQ01000155
56385
Bacteroidota
TGA
Ser
>WENV180782768
ODIQ01000173
156422
Bacteroidota
TAC
Val
>WENV180782770
ODIQ01000173
481329
Bacteroidota
>WENV180782769
ODIQ01000173
118220
Bacteroidota
GTA
Tyr
>WENV180782798
ODIQ01000199
118433
Bacteroidota
TAG
Leu
>WENV180782797
ODIQ01000199
156422
Bacteroidota
TAC
Val
>WENV180782808
ODIQ01000211
400161
Bacteroidota
GGT
Thr
>WENV180782809
ODIQ01000211
283316
Bacteroidota
CCA
Trp
>WENV180782845
ODIQ01000257
178572
Bacteroidota
CAT
Met
>WENV180782847
ODIQ01000266
46648
Bacteroidota
TAA
Leu
>WENV180782851
ODIQ01000272
73509
Bacteroidota
GAG
Leu
>WENV180782859
ODIQ01000294
118433
Bacteroidota
TAG
Leu
>WENV180782866
ODIQ01000340
156068
Bacteroidota
TAC
Val
>WENV180782867
ODIQ01000341
283315
Bacteroidota
CGT
Thr
>WENV180782871
ODIQ01000341
118432
Bacteroidota
CAG
Leu
>WENV180782872
ODIQ01000341
73509
Bacteroidota
GAG
Leu
>WENV180782868
ODIQ01000341
481045
Bacteroidota
CCC
Gly
>WENV180782884
ODIQ01000394
400815
Bacteroidota
TTC
Glu
>WENV180782885
ODIQ01000395
21008
Bacteroidota
GGA
Ser
>WENV180782916
ODIQ01000420
481328
Bacteroidota
TTG
Gln
>WENV180782955
ODIQ01000532
284457
Bacteroidota
CAT
Met
>WENV180782966
ODIQ01000570
179653
Bacteroidota
GTG
His
>WENV180782987
ODIQ01000725
46648
Bacteroidota
TAA
Leu
>WENV180782994
ODIQ01000784
118379
Bacteroidota
TAG
Leu
>WENV180783013
ODIQ01000961
156422
Bacteroidota
TAC
Val
>WENV180783015
ODIQ01000961
481329
Bacteroidota
>WENV180783014
ODIQ01000961
118220
Bacteroidota
GTA
Tyr
>WENV180783037
ODIQ01001088
284457
Bacteroidota
CAT
Met
>WENV180783038
ODIQ01001090
178571
Bacteroidota
GTT
Asn
>WENV180783076
ODIQ01001316
119316
Bacteroidota
TAG
Leu
>WENV180783077
ODIQ01001316
285586
Bacteroidota
GCC
Gly
>WENV180783098
ODIQ01001524
400949
Bacteroidota
CCT
Arg
>WENV180783107
ODIQ01001680
156128
Bacteroidota
GGG
Pro
>WENV180783118
ODIQ01001771
282852
Bacteroidota
TTT
Lys
>WENV180783181
ODIQ01002479
481044
Bacteroidota
>WENV180783192
ODIQ01002641
30327
Bacteroidota
GCT
Ser
>WENV180783248
ODIQ01003289
481267
Bacteroidota
CTG
Gln
>WENV180783294
ODIQ01004164
404109
Bacteroidota
CTC
Glu
>WENV180783330
ODIQ01004835
284313
Bacteroidota
TTT
Lys
>WENV180783353
ODIQ01005318
118220
Bacteroidota
GTA
Tyr
>WENV180783402
ODIQ01006065
178134
Bacteroidota
TGG
Pro
>WENV180783405
ODIQ01006065
73509
Bacteroidota
GAG
Leu
>WENV180783413
ODIQ01006189
404109
Bacteroidota
CTC
Glu
>WENV180783414
ODIQ01006189
404109
Bacteroidota
CTC
Glu
>WENV180783442
ODIQ01006640
179822
Bacteroidota
TGC
Ala
>WENV180783449
ODIQ01007032
481284
Bacteroidota
CCA
Trp
>WENV180783472
ODIQ01007730
179471
Bacteroidota
CAT
Met
>WENV180783473
ODIQ01007742
178571
Bacteroidota
GTT
Asn
>WENV180783501
ODIQ01008515
400161
Bacteroidota
GGT
Thr
>WENV180783500
ODIQ01008515
118220
Bacteroidota
GTA
Tyr
>WENV180783527
ODIQ01009992
179464
Bacteroidota
CAT
Met
>WENV180783540
ODIQ01010588
481045
Bacteroidota
CCC
Gly
>WENV180783541
ODIQ01010744
400850
Bacteroidota
TTC
Glu
>WENV180783549
ODIQ01011314
178133
Bacteroidota
GAT
Ile
>WENV180783636
ODIQ01014897
178133
Bacteroidota
GAT
Ile
>WENV180783710
ODIQ01020260
179467
Bacteroidota
TGT
Thr
>WENV180783712
ODIQ01020260
281463
Bacteroidota
TCC
Gly
>WENV180783719
ODIQ01020704
483528
Bacteroidota
GCA
Cys
>WENV180783733
ODIQ01022177
480996
Bacteroidota
CCA
Trp
>WENV180783762
ODIQ01025395
157442
Bacteroidota
TAC
Val
>WENV180783761
ODIQ01025395
156405
Bacteroidota
TAC
Val
>WENV180783798
ODIQ01028047
178133
Bacteroidota
GAT
Ile
>WENV180783810
ODIQ01030249
156424
Bacteroidota
TGG
Pro
>WENV180783811
ODIQ01030249
179470
Bacteroidota
TCT
Arg
>WENV180784030
ODIQ01086566
75391
Bacteroidota
GAG
Leu
>WENV180784045
ODIQ01097891
178179
Bacteroidota
GGC
Ala
>WENV180784051
ODIQ01101759
406019
Bacteroidota
CCG
Arg
>WENV180784064
ODIQ01111579
21173
Bacteroidota
GGA
Ser
>WENV180784122
ODIQ01157923
287319
Bacteroidota
TTT
Lys
>WENV180784123
ODIQ01159861
56385
Bacteroidota
TGA
Ser
>WENV180784139
ODIQ01176042
156422
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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