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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
109 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180815446
ODJP01000430
118433
Bacteroidota
TAG
Leu
>WENV180815595
ODJP01000841
118433
Bacteroidota
TAG
Leu
>WENV180816609
ODJP01030210
235988
Bacteroidota
TGC
Ala
>WENV180816061
ODJP01003962
175904
Bacteroidota
CGG
Pro
>WENV180815257
ODJP01000120
400161
Bacteroidota
GGT
Thr
>WENV180815331
ODJP01000221
400161
Bacteroidota
GGT
Thr
>WENV180816031
ODJP01003600
400161
Bacteroidota
GGT
Thr
>WENV180816510
ODJP01019303
179467
Bacteroidota
TGT
Thr
>WENV180816883
ODJP01091285
211453
Bacteroidota
TCT
Arg
>WENV180816295
ODJP01008247
192166
Bacteroidota
GTT
Asn
>WENV180815182
ODJP01000057
282852
Bacteroidota
TTT
Lys
>WENV180816576
ODJP01025779
282852
Bacteroidota
TTT
Lys
>WENV180816807
ODJP01063601
402390
Bacteroidota
TTC
Glu
>WENV180815125
ODJP01000026
481329
Bacteroidota
>WENV180816081
ODJP01004194
481329
Bacteroidota
>WENV180815224
ODJP01000093
400949
Bacteroidota
CCT
Arg
>WENV180815406
ODJP01000314
400949
Bacteroidota
CCT
Arg
>WENV180816445
ODJP01014419
118221
Bacteroidota
CAA
Leu
>WENV180816311
ODJP01008930
222068
Bacteroidota
GAT
Ile
>WENV180815621
ODJP01000924
481267
Bacteroidota
CTG
Gln
>WENV180816453
ODJP01015205
348707
Bacteroidota
TTT
Lys
>WENV180815258
ODJP01000120
283316
Bacteroidota
CCA
Trp
>WENV180815332
ODJP01000221
283316
Bacteroidota
CCA
Trp
>WENV180815074
ODJP01000003
178571
Bacteroidota
GTT
Asn
>WENV180815189
ODJP01000060
178571
Bacteroidota
GTT
Asn
>WENV180816961
ODJP01134962
178571
Bacteroidota
GTT
Asn
>WENV180816416
ODJP01012908
157895
Bacteroidota
TAC
Val
>WENV180816972
ODJP01135335
157895
Bacteroidota
TAC
Val
>WENV180815174
ODJP01000050
178572
Bacteroidota
CAT
Met
>WENV180815229
ODJP01000097
178572
Bacteroidota
CAT
Met
>WENV180816285
ODJP01007708
157400
Bacteroidota
TAC
Val
>WENV180815293
ODJP01000169
56385
Bacteroidota
TGA
Ser
>WENV180815553
ODJP01000715
56385
Bacteroidota
TGA
Ser
>WENV180815442
ODJP01000400
57645
Bacteroidota
TGA
Ser
>WENV180815325
ODJP01000215
431429
Bacteroidota
CCT
Arg
>WENV180815622
ODJP01000926
30327
Bacteroidota
GCT
Ser
>WENV180815411
ODJP01000329
20356
Bacteroidota
GGA
Ser
>WENV180815375
ODJP01000273
242241
Bacteroidota
GTC
Asp
>WENV180816970
ODJP01135317
242241
Bacteroidota
GTC
Asp
>WENV180816733
ODJP01049502
404663
Bacteroidota
GGT
Thr
>WENV180816435
ODJP01013873
400850
Bacteroidota
TTC
Glu
>WENV180816512
ODJP01019303
317815
Bacteroidota
TCC
Gly
>WENV180816519
ODJP01019858
292874
Bacteroidota
GAA
Phe
>WENV180815131
ODJP01000028
175944
Bacteroidota
CAT
Met
>WENV180815183
ODJP01000058
283315
Bacteroidota
CGT
Thr
>WENV180815260
ODJP01000123
283315
Bacteroidota
CGT
Thr
>WENV180815500
ODJP01000574
283315
Bacteroidota
CGT
Thr
>WENV180816436
ODJP01013901
283315
Bacteroidota
CGT
Thr
>WENV180816821
ODJP01065947
187105
Bacteroidota
CAT
Met
>WENV180815188
ODJP01000060
400815
Bacteroidota
TTC
Glu
>WENV180815275
ODJP01000149
156128
Bacteroidota
GGG
Pro
>WENV180815110
ODJP01000016
20533
Bacteroidota
GGA
Ser
>WENV180816570
ODJP01025098
187358
Bacteroidota
GTG
His
>WENV180816514
ODJP01019356
483469
Bacteroidota
TTG
Gln
>WENV180816730
ODJP01048124
483469
Bacteroidota
TTG
Gln
>WENV180815116
ODJP01000019
404109
Bacteroidota
CTC
Glu
>WENV180815117
ODJP01000019
404109
Bacteroidota
CTC
Glu
>WENV180816470
ODJP01016278
47445
Bacteroidota
TAA
Leu
>WENV180815132
ODJP01000028
156383
Bacteroidota
GGG
Pro
>WENV180815302
ODJP01000179
156383
Bacteroidota
GGG
Pro
>WENV180816589
ODJP01027132
147999
Bacteroidota
CAA
Leu
>WENV180816312
ODJP01008930
179822
Bacteroidota
TGC
Ala
>WENV180815226
ODJP01000093
46648
Bacteroidota
TAA
Leu
>WENV180815289
ODJP01000161
46648
Bacteroidota
TAA
Leu
>WENV180815407
ODJP01000314
46648
Bacteroidota
TAA
Leu
>WENV180815994
ODJP01003196
46648
Bacteroidota
TAA
Leu
>WENV180816864
ODJP01083476
179471
Bacteroidota
CAT
Met
>WENV180815097
ODJP01000012
118432
Bacteroidota
CAG
Leu
>WENV180816047
ODJP01003790
118432
Bacteroidota
CAG
Leu
>WENV180816617
ODJP01031909
280478
Bacteroidota
GCC
Gly
>WENV180815800
ODJP01001777
284236
Bacteroidota
CGG
Pro
>WENV180816597
ODJP01027607
187400
Bacteroidota
GTT
Asn
>WENV180816967
ODJP01135192
187400
Bacteroidota
GTT
Asn
>WENV180816023
ODJP01003549
284409
Bacteroidota
CAT
Met
>WENV180815081
ODJP01000007
284457
Bacteroidota
CAT
Met
>WENV180815581
ODJP01000784
284457
Bacteroidota
CAT
Met
>WENV180815707
ODJP01001244
284457
Bacteroidota
CAT
Met
>WENV180815376
ODJP01000273
187814
Bacteroidota
GTC
Asp
>WENV180815313
ODJP01000206
178134
Bacteroidota
TGG
Pro
>WENV180815965
ODJP01002981
178134
Bacteroidota
TGG
Pro
>WENV180815095
ODJP01000012
178134
Bacteroidota
TGG
Pro
>WENV180815101
ODJP01000012
118220
Bacteroidota
GTA
Tyr
>WENV180815124
ODJP01000026
118220
Bacteroidota
GTA
Tyr
>WENV180815256
ODJP01000120
118220
Bacteroidota
GTA
Tyr
>WENV180815330
ODJP01000221
118220
Bacteroidota
GTA
Tyr
>WENV180815515
ODJP01000615
118220
Bacteroidota
GTA
Tyr
>WENV180816603
ODJP01029476
284313
Bacteroidota
TTT
Lys
>WENV180816974
ODJP01135503
460845
Bacteroidota
CTC
Glu
>WENV180815193
ODJP01000064
481044
Bacteroidota
>WENV180815205
ODJP01000074
179653
Bacteroidota
GTG
His
>WENV180816923
ODJP01121256
187426
Bacteroidota
GGC
Ala
>WENV180815225
ODJP01000093
481328
Bacteroidota
TTG
Gln
>WENV180815987
ODJP01003137
481328
Bacteroidota
TTG
Gln
>WENV180816209
ODJP01006360
481328
Bacteroidota
TTG
Gln
>WENV180816469
ODJP01016278
285586
Bacteroidota
GCC
Gly
>WENV180815389
ODJP01000286
400088
Bacteroidota
GGT
Thr
>WENV180816729
ODJP01047897
285750
Bacteroidota
CCC
Gly
>WENV180816543
ODJP01022395
373714
Bacteroidota
GCC
Gly
>WENV180815777
ODJP01001645
188555
Bacteroidota
CAT
Met
>WENV180815456
ODJP01000460
284456
Bacteroidota
CGG
Pro
>WENV180815593
ODJP01000823
284456
Bacteroidota
CGG
Pro
>WENV180815098
ODJP01000012
73509
Bacteroidota
GAG
Leu
>WENV180815316
ODJP01000206
73509
Bacteroidota
GAG
Leu
>WENV180816455
ODJP01015205
75391
Bacteroidota
GAG
Leu
>WENV180815261
ODJP01000123
481045
Bacteroidota
CCC
Gly
>WENV180815501
ODJP01000574
481045
Bacteroidota
CCC
Gly
>WENV180816437
ODJP01013901
481045
Bacteroidota
CCC
Gly
>WENV180815709
ODJP01001261
170323
Bacteroidota
GGG
Pro
>WENV180816827
ODJP01067305
195454
Bacteroidota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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