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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
100 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180959209
ODUM01000168
481329
Bacteroidota
>WENV180959213
ODUM01000175
481044
Bacteroidota
>WENV180959398
ODUM01000552
118221
Bacteroidota
CAA
Leu
>WENV180960585
ODUM01069908
118432
Bacteroidota
CAG
Leu
>WENV180960620
ODUM01083404
118432
Bacteroidota
CAG
Leu
>WENV180959003
ODUM01000021
178572
Bacteroidota
CAT
Met
>WENV180959053
ODUM01000037
178572
Bacteroidota
CAT
Met
>WENV180959085
ODUM01000056
175944
Bacteroidota
CAT
Met
>WENV180959138
ODUM01000098
175944
Bacteroidota
CAT
Met
>WENV180960610
ODUM01079973
180199
Bacteroidota
CAT
Met
>WENV180959858
ODUM01004362
179471
Bacteroidota
CAT
Met
>WENV180958988
ODUM01000012
284457
Bacteroidota
CAT
Met
>WENV180959005
ODUM01000023
284457
Bacteroidota
CAT
Met
>WENV180959827
ODUM01003730
284457
Bacteroidota
CAT
Met
>WENV180959269
ODUM01000212
283316
Bacteroidota
CCA
Trp
>WENV180959376
ODUM01000478
283316
Bacteroidota
CCA
Trp
>WENV180959410
ODUM01000580
283316
Bacteroidota
CCA
Trp
>WENV180959876
ODUM01004721
481284
Bacteroidota
CCA
Trp
>WENV180959182
ODUM01000133
372845
Bacteroidota
CCA
Trp
>WENV180959211
ODUM01000170
285750
Bacteroidota
CCC
Gly
>WENV180959287
ODUM01000253
481045
Bacteroidota
CCC
Gly
>WENV180959370
ODUM01000469
481045
Bacteroidota
CCC
Gly
>WENV180960688
ODUM01133120
406019
Bacteroidota
CCG
Arg
>WENV180959163
ODUM01000118
400949
Bacteroidota
CCT
Arg
>WENV180959433
ODUM01000645
400949
Bacteroidota
CCT
Arg
>WENV180959360
ODUM01000441
431429
Bacteroidota
CCT
Arg
>WENV180959463
ODUM01000768
284236
Bacteroidota
CGG
Pro
>WENV180959100
ODUM01000071
284456
Bacteroidota
CGG
Pro
>WENV180959301
ODUM01000282
284456
Bacteroidota
CGG
Pro
>WENV180958980
ODUM01000010
283315
Bacteroidota
CGT
Thr
>WENV180959286
ODUM01000253
283315
Bacteroidota
CGT
Thr
>WENV180959369
ODUM01000469
283315
Bacteroidota
CGT
Thr
>WENV180959707
ODUM01002471
331443
Bacteroidota
CGT
Thr
>WENV180959207
ODUM01000161
404109
Bacteroidota
CTC
Glu
>WENV180959110
ODUM01000074
460845
Bacteroidota
CTC
Glu
>WENV180959612
ODUM01001683
460845
Bacteroidota
CTC
Glu
>WENV180958999
ODUM01000021
481267
Bacteroidota
CTG
Gln
>WENV180959908
ODUM01005155
292874
Bacteroidota
GAA
Phe
>WENV180958986
ODUM01000011
73509
Bacteroidota
GAG
Leu
>WENV180960621
ODUM01083404
73509
Bacteroidota
GAG
Leu
>WENV180960525
ODUM01051428
222068
Bacteroidota
GAT
Ile
>WENV180959535
ODUM01001122
228511
Bacteroidota
GAT
Ile
>WENV180959161
ODUM01000115
280478
Bacteroidota
GCC
Gly
>WENV180959400
ODUM01000562
373714
Bacteroidota
GCC
Gly
>WENV180959117
ODUM01000086
30327
Bacteroidota
GCT
Ser
>WENV180958990
ODUM01000015
20533
Bacteroidota
GGA
Ser
>WENV180959554
ODUM01001248
175886
Bacteroidota
GGC
Ala
>WENV180959075
ODUM01000048
156383
Bacteroidota
GGG
Pro
>WENV180959086
ODUM01000056
156383
Bacteroidota
GGG
Pro
>WENV180959268
ODUM01000212
400161
Bacteroidota
GGT
Thr
>WENV180959375
ODUM01000478
400161
Bacteroidota
GGT
Thr
>WENV180959181
ODUM01000133
404663
Bacteroidota
GGT
Thr
>WENV180959204
ODUM01000160
115044
Bacteroidota
GTA
Tyr
>WENV180958992
ODUM01000017
118220
Bacteroidota
GTA
Tyr
>WENV180959219
ODUM01000183
118220
Bacteroidota
GTA
Tyr
>WENV180959267
ODUM01000212
118220
Bacteroidota
GTA
Tyr
>WENV180959374
ODUM01000478
118220
Bacteroidota
GTA
Tyr
>WENV180959494
ODUM01000931
118220
Bacteroidota
GTA
Tyr
>WENV180960704
ODUM01139653
118220
Bacteroidota
GTA
Tyr
>WENV180959860
ODUM01004403
179468
Bacteroidota
GTC
Asp
>WENV180960458
ODUM01037949
179468
Bacteroidota
GTC
Asp
>WENV180959011
ODUM01000027
179653
Bacteroidota
GTG
His
>WENV180960671
ODUM01117289
192166
Bacteroidota
GTT
Asn
>WENV180959007
ODUM01000025
178571
Bacteroidota
GTT
Asn
>WENV180959310
ODUM01000300
178571
Bacteroidota
GTT
Asn
>WENV180959549
ODUM01001212
178571
Bacteroidota
GTT
Asn
>WENV180959165
ODUM01000118
46648
Bacteroidota
TAA
Leu
>WENV180959343
ODUM01000380
46648
Bacteroidota
TAA
Leu
>WENV180959454
ODUM01000721
46648
Bacteroidota
TAA
Leu
>WENV180959828
ODUM01003743
46648
Bacteroidota
TAA
Leu
>WENV180960334
ODUM01023840
157895
Bacteroidota
TAC
Val
>WENV180958991
ODUM01000017
172085
Bacteroidota
TAC
Val
>WENV180958997
ODUM01000020
172085
Bacteroidota
TAC
Val
>WENV180959063
ODUM01000043
172085
Bacteroidota
TAC
Val
>WENV180959115
ODUM01000080
172085
Bacteroidota
TAC
Val
>WENV180959116
ODUM01000080
172085
Bacteroidota
TAC
Val
>WENV180959142
ODUM01000104
172085
Bacteroidota
TAC
Val
>WENV180959166
ODUM01000119
172085
Bacteroidota
TAC
Val
>WENV180959167
ODUM01000119
172085
Bacteroidota
TAC
Val
>WENV180959218
ODUM01000183
172085
Bacteroidota
TAC
Val
>WENV180959493
ODUM01000931
172085
Bacteroidota
TAC
Val
>WENV180960697
ODUM01137309
172085
Bacteroidota
TAC
Val
>WENV180959964
ODUM01006470
156405
Bacteroidota
TAC
Val
>WENV180959141
ODUM01000104
118433
Bacteroidota
TAG
Leu
>WENV180959446
ODUM01000678
118433
Bacteroidota
TAG
Leu
>WENV180960114
ODUM01010860
211453
Bacteroidota
TCT
Arg
>WENV180959470
ODUM01000810
56385
Bacteroidota
TGA
Ser
>WENV180960572
ODUM01066387
70604
Bacteroidota
TGA
Ser
>WENV180960526
ODUM01051428
179822
Bacteroidota
TGC
Ala
>WENV180958983
ODUM01000011
178134
Bacteroidota
TGG
Pro
>WENV180959220
ODUM01000183
178134
Bacteroidota
TGG
Pro
>WENV180959683
ODUM01002249
179467
Bacteroidota
TGT
Thr
>WENV180959726
ODUM01002627
400850
Bacteroidota
TTC
Glu
>WENV180959006
ODUM01000025
400815
Bacteroidota
TTC
Glu
>WENV180960587
ODUM01070656
483469
Bacteroidota
TTG
Gln
>WENV180959164
ODUM01000118
481328
Bacteroidota
TTG
Gln
>WENV180959729
ODUM01002655
481328
Bacteroidota
TTG
Gln
>WENV180958993
ODUM01000017
282852
Bacteroidota
TTT
Lys
>WENV180959168
ODUM01000119
282852
Bacteroidota
TTT
Lys
>WENV180960256
ODUM01018483
284313
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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