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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
112 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181085373
OEAX01007084
481329
Bacteroidota
>WENV181084991
OEAX01000815
118221
Bacteroidota
CAA
Leu
>WENV181084652
OEAX01000006
147999
Bacteroidota
CAA
Leu
>WENV181085267
OEAX01004267
147999
Bacteroidota
CAA
Leu
>WENV181085189
OEAX01002654
101147
Bacteroidota
CAG
Leu
>WENV181085458
OEAX01010894
179464
Bacteroidota
CAT
Met
>WENV181084627
OEAX01000003
281190
Bacteroidota
CAT
Met
>WENV181085827
OEAX01104237
178572
Bacteroidota
CAT
Met
>WENV181084732
OEAX01000044
187105
Bacteroidota
CAT
Met
>WENV181084981
OEAX01000750
179471
Bacteroidota
CAT
Met
>WENV181085381
OEAX01007388
179471
Bacteroidota
CAT
Met
>WENV181084736
OEAX01000054
179471
Bacteroidota
CAT
Met
>WENV181084724
OEAX01000039
284409
Bacteroidota
CAT
Met
>WENV181085372
OEAX01007014
284457
Bacteroidota
CAT
Met
>WENV181085157
OEAX01002018
283316
Bacteroidota
CCA
Trp
>WENV181085119
OEAX01001701
481284
Bacteroidota
CCA
Trp
>WENV181085754
OEAX01054117
293174
Bacteroidota
CCC
Gly
>WENV181084941
OEAX01000585
285750
Bacteroidota
CCC
Gly
>WENV181085251
OEAX01003545
481045
Bacteroidota
CCC
Gly
>WENV181084719
OEAX01000030
406019
Bacteroidota
CCG
Arg
>WENV181085161
OEAX01002171
400949
Bacteroidota
CCT
Arg
>WENV181084710
OEAX01000025
406393
Bacteroidota
CCT
Arg
>WENV181085229
OEAX01003116
406393
Bacteroidota
CCT
Arg
>WENV181085414
OEAX01008434
284236
Bacteroidota
CGG
Pro
>WENV181085184
OEAX01002571
284456
Bacteroidota
CGG
Pro
>WENV181085250
OEAX01003545
283315
Bacteroidota
CGT
Thr
>WENV181085695
OEAX01037484
404109
Bacteroidota
CTC
Glu
>WENV181085478
OEAX01011251
481267
Bacteroidota
CTG
Gln
>WENV181084653
OEAX01000006
293216
Bacteroidota
CTT
Lys
>WENV181085121
OEAX01001731
292874
Bacteroidota
GAA
Phe
>WENV181084939
OEAX01000576
73509
Bacteroidota
GAG
Leu
>WENV181085248
OEAX01003537
73509
Bacteroidota
GAG
Leu
>WENV181084757
OEAX01000072
75391
Bacteroidota
GAG
Leu
>WENV181084843
OEAX01000200
75391
Bacteroidota
GAG
Leu
>WENV181085494
OEAX01012941
178133
Bacteroidota
GAT
Ile
>WENV181085710
OEAX01039240
178133
Bacteroidota
GAT
Ile
>WENV181085748
OEAX01051944
178133
Bacteroidota
GAT
Ile
>WENV181084800
OEAX01000115
483528
Bacteroidota
GCA
Cys
>WENV181085436
OEAX01009567
280478
Bacteroidota
GCC
Gly
>WENV181084834
OEAX01000178
285586
Bacteroidota
GCC
Gly
>WENV181085147
OEAX01001961
285586
Bacteroidota
GCC
Gly
>WENV181085316
OEAX01005466
285586
Bacteroidota
GCC
Gly
>WENV181085712
OEAX01039419
20533
Bacteroidota
GGA
Ser
>WENV181085374
OEAX01007120
21008
Bacteroidota
GGA
Ser
>WENV181084739
OEAX01000063
21173
Bacteroidota
GGA
Ser
>WENV181085265
OEAX01004177
175886
Bacteroidota
GGC
Ala
>WENV181085822
OEAX01100565
178179
Bacteroidota
GGC
Ala
>WENV181084617
OEAX01000003
187426
Bacteroidota
GGC
Ala
>WENV181084622
OEAX01000003
292594
Bacteroidota
GGG
Pro
>WENV181085635
OEAX01027913
156128
Bacteroidota
GGG
Pro
>WENV181085384
OEAX01007503
156383
Bacteroidota
GGG
Pro
>WENV181085156
OEAX01002018
400161
Bacteroidota
GGT
Thr
>WENV181084931
OEAX01000540
406285
Bacteroidota
GGT
Thr
>WENV181085633
OEAX01026701
404663
Bacteroidota
GGT
Thr
>WENV181084895
OEAX01000339
399898
Bacteroidota
GGT
Thr
>WENV181084929
OEAX01000540
120171
Bacteroidota
GTA
Tyr
>WENV181085762
OEAX01057898
118220
Bacteroidota
GTA
Tyr
>WENV181084669
OEAX01000008
187358
Bacteroidota
GTG
His
>WENV181084733
OEAX01000044
187358
Bacteroidota
GTG
His
>WENV181085123
OEAX01001743
179653
Bacteroidota
GTG
His
>WENV181085098
OEAX01001634
178571
Bacteroidota
GTT
Asn
>WENV181084685
OEAX01000020
179905
Bacteroidota
GTT
Asn
>WENV181084737
OEAX01000059
179905
Bacteroidota
GTT
Asn
>WENV181084835
OEAX01000178
47445
Bacteroidota
TAA
Leu
>WENV181085148
OEAX01001961
47445
Bacteroidota
TAA
Leu
>WENV181084984
OEAX01000775
46648
Bacteroidota
TAA
Leu
>WENV181084936
OEAX01000559
156422
Bacteroidota
TAC
Val
>WENV181084993
OEAX01000836
156422
Bacteroidota
TAC
Val
>WENV181085342
OEAX01006163
156422
Bacteroidota
TAC
Val
>WENV181085252
OEAX01003667
157146
Bacteroidota
TAC
Val
>WENV181085133
OEAX01001886
157146
Bacteroidota
TAC
Val
>WENV181085134
OEAX01001886
157146
Bacteroidota
TAC
Val
>WENV181084619
OEAX01000003
157400
Bacteroidota
TAC
Val
>WENV181084620
OEAX01000003
157400
Bacteroidota
TAC
Val
>WENV181084809
OEAX01000125
157400
Bacteroidota
TAC
Val
>WENV181084810
OEAX01000125
157400
Bacteroidota
TAC
Val
>WENV181085493
OEAX01012918
157442
Bacteroidota
TAC
Val
>WENV181085492
OEAX01012918
156405
Bacteroidota
TAC
Val
>WENV181085423
OEAX01008716
118433
Bacteroidota
TAG
Leu
>WENV181085482
OEAX01011681
118379
Bacteroidota
TAG
Leu
>WENV181085315
OEAX01005466
119316
Bacteroidota
TAG
Leu
>WENV181085733
OEAX01047369
293273
Bacteroidota
TCC
Gly
>WENV181084676
OEAX01000014
187632
Bacteroidota
TCG
Arg
>WENV181084625
OEAX01000003
187628
Bacteroidota
TCT
Arg
>WENV181085815
OEAX01094909
187628
Bacteroidota
TCT
Arg
>WENV181084989
OEAX01000792
179470
Bacteroidota
TCT
Arg
>WENV181084626
OEAX01000003
57660
Bacteroidota
TGA
Ser
>WENV181084677
OEAX01000014
57660
Bacteroidota
TGA
Ser
>WENV181085295
OEAX01004967
56385
Bacteroidota
TGA
Ser
>WENV181085397
OEAX01007702
56385
Bacteroidota
TGA
Ser
>WENV181085425
OEAX01008765
179822
Bacteroidota
TGC
Ala
>WENV181085432
OEAX01009364
178134
Bacteroidota
TGG
Pro
>WENV181084988
OEAX01000792
157477
Bacteroidota
TGG
Pro
>WENV181084774
OEAX01000091
176809
Bacteroidota
TGT
Thr
>WENV181084814
OEAX01000135
176809
Bacteroidota
TGT
Thr
>WENV181084678
OEAX01000014
402390
Bacteroidota
TTC
Glu
>WENV181084679
OEAX01000014
402390
Bacteroidota
TTC
Glu
>WENV181085003
OEAX01000881
402390
Bacteroidota
TTC
Glu
>WENV181085146
OEAX01001958
402390
Bacteroidota
TTC
Glu
>WENV181085089
OEAX01001565
400850
Bacteroidota
TTC
Glu
>WENV181085090
OEAX01001565
400850
Bacteroidota
TTC
Glu
>WENV181085343
OEAX01006210
400815
Bacteroidota
TTC
Glu
>WENV181085186
OEAX01002654
482909
Bacteroidota
TTG
Gln
>WENV181084734
OEAX01000044
483469
Bacteroidota
TTG
Gln
>WENV181084996
OEAX01000847
483469
Bacteroidota
TTG
Gln
>WENV181085247
OEAX01003475
481328
Bacteroidota
TTG
Gln
>WENV181085557
OEAX01018961
284237
Bacteroidota
TTT
Lys
>WENV181084654
OEAX01000006
287319
Bacteroidota
TTT
Lys
>WENV181084756
OEAX01000072
287319
Bacteroidota
TTT
Lys
>WENV181084840
OEAX01000200
287319
Bacteroidota
TTT
Lys
>WENV181084841
OEAX01000200
287319
Bacteroidota
TTT
Lys
>WENV181085452
OEAX01010633
284313
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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