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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181108287
OEEJ01000002
394247
Bacteroidota
CTC
Glu
>WENV181108290
OEEJ01000003
413952
Bacteroidota
>WENV181108295
OEEJ01000004
96124
Bacteroidota
TAG
Leu
>WENV181108299
OEEJ01000004
412439
Bacteroidota
CCA
Trp
>WENV181108301
OEEJ01000004
179315
Bacteroidota
TGC
Ala
>WENV181108302
OEEJ01000005
147941
Bacteroidota
TGT
Thr
>WENV181108304
OEEJ01000005
268513
Bacteroidota
TCC
Gly
>WENV181108306
OEEJ01000005
340029
Bacteroidota
TTC
Glu
>WENV181108307
OEEJ01000005
340029
Bacteroidota
TTC
Glu
>WENV181108308
OEEJ01000005
251411
Bacteroidota
GAA
Phe
>WENV181108351
OEEJ01000009
141635
Bacteroidota
TAC
Val
>WENV181108363
OEEJ01000010
339412
Bacteroidota
GGT
Thr
>WENV181108381
OEEJ01000015
127253
Bacteroidota
GGG
Pro
>WENV181108388
OEEJ01000017
302002
Bacteroidota
CGT
Thr
>WENV181108419
OEEJ01000020
151121
Bacteroidota
CAT
Met
>WENV181108442
OEEJ01000024
59182
Bacteroidota
GAG
Leu
>WENV181108468
OEEJ01000027
24174
Bacteroidota
GCT
Ser
>WENV181108485
OEEJ01000030
147939
Bacteroidota
CAT
Met
>WENV181108507
OEEJ01000036
143758
Bacteroidota
TGG
Pro
>WENV181108508
OEEJ01000036
176247
Bacteroidota
TCT
Arg
>WENV181108514
OEEJ01000037
141635
Bacteroidota
TAC
Val
>WENV181108524
OEEJ01000042
127951
Bacteroidota
TAC
Val
>WENV181108525
OEEJ01000043
155123
Bacteroidota
GTT
Asn
>WENV181108535
OEEJ01000049
238671
Bacteroidota
TTT
Lys
>WENV181108537
OEEJ01000049
238671
Bacteroidota
TTT
Lys
>WENV181108538
OEEJ01000050
413663
Bacteroidota
CTG
Gln
>WENV181108571
OEEJ01000079
148096
Bacteroidota
GTG
His
>WENV181108589
OEEJ01000083
144639
Bacteroidota
GGC
Ala
>WENV181108593
OEEJ01000089
340120
Bacteroidota
CCT
Arg
>WENV181108594
OEEJ01000089
412479
Bacteroidota
TTG
Gln
>WENV181108595
OEEJ01000089
37076
Bacteroidota
TAA
Leu
>WENV181108597
OEEJ01000091
235129
Bacteroidota
GCC
Gly
>WENV181108599
OEEJ01000091
16898
Bacteroidota
GGA
Ser
>WENV181108603
OEEJ01000094
81773
Bacteroidota
CAG
Leu
>WENV181108632
OEEJ01000120
240012
Bacteroidota
CCC
Gly
>WENV181108649
OEEJ01000134
141635
Bacteroidota
TAC
Val
>WENV181108650
OEEJ01000134
95986
Bacteroidota
GTA
Tyr
>WENV181108651
OEEJ01000134
412480
Bacteroidota
>WENV181108652
OEEJ01000134
148097
Bacteroidota
TGG
Pro
>WENV181108669
OEEJ01000146
96147
Bacteroidota
TAG
Leu
>WENV181108671
OEEJ01000147
313363
Bacteroidota
GAA
Phe
>WENV181108688
OEEJ01000170
237796
Bacteroidota
CGT
Thr
>WENV181108689
OEEJ01000170
412236
Bacteroidota
CCC
Gly
>WENV181108690
OEEJ01000174
95987
Bacteroidota
CAA
Leu
>WENV181108702
OEEJ01000192
130479
Bacteroidota
TAC
Val
>WENV181108703
OEEJ01000192
133943
Bacteroidota
TAC
Val
>WENV181108739
OEEJ01000231
16494
Bacteroidota
GGA
Ser
>WENV181108753
OEEJ01000251
147945
Bacteroidota
CAT
Met
>WENV181108761
OEEJ01000267
147148
Bacteroidota
CAT
Met
>WENV181108778
OEEJ01000330
238810
Bacteroidota
CGG
Pro
>WENV181108782
OEEJ01000353
95986
Bacteroidota
GTA
Tyr
>WENV181108783
OEEJ01000353
339412
Bacteroidota
GGT
Thr
>WENV181108784
OEEJ01000353
237797
Bacteroidota
CCA
Trp
>WENV181108817
OEEJ01000435
196394
Bacteroidota
GTC
Asp
>WENV181108856
OEEJ01000761
238811
Bacteroidota
CAT
Met
>WENV181109324
OEEJ01025183
119907
Bacteroidota
CAA
Leu
>WENV181109415
OEEJ01045707
97336
Bacteroidota
CAG
Leu
>WENV181109416
OEEJ01045707
59498
Bacteroidota
GAG
Leu
>WENV181109492
OEEJ01087341
237797
Bacteroidota
CCA
Trp
>WENV181109503
OEEJ01093569
148247
Bacteroidota
TGC
Ala
>WENV181109518
OEEJ01102169
136207
Bacteroidota
TAC
Val
>WENV181109544
OEEJ01117203
141635
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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