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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
140 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181109753
OEEK01000151
295385
Bacteroidota
CCA
Trp
>WENV181110014
OEEK01000541
285360
Bacteroidota
TTT
Lys
>WENV181110686
OEEK01007044
285360
Bacteroidota
TTT
Lys
>WENV181110748
OEEK01008938
285360
Bacteroidota
TTT
Lys
>WENV181110407
OEEK01002467
117741
Bacteroidota
TAG
Leu
>WENV181110509
OEEK01003722
117741
Bacteroidota
TAG
Leu
>WENV181110012
OEEK01000538
398829
Bacteroidota
CCT
Arg
>WENV181110172
OEEK01001060
398829
Bacteroidota
CCT
Arg
>WENV181111794
OEEK01241592
175838
Bacteroidota
GTT
Asn
>WENV181110092
OEEK01000726
404226
Bacteroidota
CCT
Arg
>WENV181109723
OEEK01000118
175904
Bacteroidota
CGG
Pro
>WENV181110502
OEEK01003626
175904
Bacteroidota
CGG
Pro
>WENV181111678
OEEK01174053
73057
Bacteroidota
GAG
Leu
>WENV181110714
OEEK01007845
289031
Bacteroidota
CAT
Met
>WENV181109774
OEEK01000165
280553
Bacteroidota
TTT
Lys
>WENV181109936
OEEK01000405
280553
Bacteroidota
TTT
Lys
>WENV181109963
OEEK01000452
280557
Bacteroidota
CAT
Met
>WENV181110077
OEEK01000674
280557
Bacteroidota
CAT
Met
>WENV181110087
OEEK01000713
280557
Bacteroidota
CAT
Met
>WENV181110341
OEEK01001990
20206
Bacteroidota
GGA
Ser
>WENV181110418
OEEK01002564
20206
Bacteroidota
GGA
Ser
>WENV181110325
OEEK01001867
483416
Bacteroidota
CTG
Gln
>WENV181110551
OEEK01004314
483416
Bacteroidota
CTG
Gln
>WENV181110128
OEEK01000869
282712
Bacteroidota
TTT
Lys
>WENV181110093
OEEK01000726
398871
Bacteroidota
TTC
Glu
>WENV181110094
OEEK01000726
398871
Bacteroidota
TTC
Glu
>WENV181110532
OEEK01004188
201819
Bacteroidota
CAT
Met
>WENV181111784
OEEK01240393
56493
Bacteroidota
TGA
Ser
>WENV181111790
OEEK01241492
175906
Bacteroidota
GTG
His
>WENV181110048
OEEK01000616
175903
Bacteroidota
GTG
His
>WENV181109574
OEEK01000017
351598
Bacteroidota
CGG
Pro
>WENV181109672
OEEK01000066
351598
Bacteroidota
CGG
Pro
>WENV181109720
OEEK01000112
351598
Bacteroidota
CGG
Pro
>WENV181109882
OEEK01000319
351598
Bacteroidota
CGG
Pro
>WENV181110516
OEEK01003852
351598
Bacteroidota
CGG
Pro
>WENV181110157
OEEK01000996
291612
Bacteroidota
>WENV181111118
OEEK01030226
291612
Bacteroidota
>WENV181109557
OEEK01000006
118089
Bacteroidota
TAG
Leu
>WENV181110020
OEEK01000557
118089
Bacteroidota
TAG
Leu
>WENV181109724
OEEK01000118
280530
Bacteroidota
CCA
Trp
>WENV181110223
OEEK01001241
175936
Bacteroidota
CAT
Met
>WENV181109634
OEEK01000038
203954
Bacteroidota
GTC
Asp
>WENV181109743
OEEK01000136
203954
Bacteroidota
GTC
Asp
>WENV181109859
OEEK01000287
203954
Bacteroidota
GTC
Asp
>WENV181109837
OEEK01000261
178907
Bacteroidota
TCT
Arg
>WENV181110809
OEEK01010694
405877
Bacteroidota
GGT
Thr
>WENV181109787
OEEK01000186
182267
Bacteroidota
GTT
Asn
>WENV181109788
OEEK01000186
182267
Bacteroidota
GTT
Asn
>WENV181109789
OEEK01000186
182267
Bacteroidota
GTT
Asn
>WENV181109601
OEEK01000023
20449
Bacteroidota
GGA
Ser
>WENV181109825
OEEK01000248
20449
Bacteroidota
GGA
Ser
>WENV181110204
OEEK01001189
20449
Bacteroidota
GGA
Ser
>WENV181109820
OEEK01000236
56072
Bacteroidota
TAA
Leu
>WENV181110273
OEEK01001514
56072
Bacteroidota
TAA
Leu
>WENV181109802
OEEK01000220
57807
Bacteroidota
TGA
Ser
>WENV181110007
OEEK01000518
57807
Bacteroidota
TGA
Ser
>WENV181110153
OEEK01000990
57807
Bacteroidota
TGA
Ser
>WENV181110368
OEEK01002148
57807
Bacteroidota
TGA
Ser
>WENV181111787
OEEK01240867
57807
Bacteroidota
TGA
Ser
>WENV181110018
OEEK01000555
175886
Bacteroidota
GGC
Ala
>WENV181110249
OEEK01001351
175902
Bacteroidota
GGC
Ala
>WENV181110552
OEEK01004360
175902
Bacteroidota
GGC
Ala
>WENV181109618
OEEK01000028
179697
Bacteroidota
TGT
Thr
>WENV181109839
OEEK01000264
398860
Bacteroidota
CTC
Glu
>WENV181110106
OEEK01000817
480404
Bacteroidota
TTG
Gln
>WENV181110118
OEEK01000842
480404
Bacteroidota
TTG
Gln
>WENV181110664
OEEK01006522
480404
Bacteroidota
TTG
Gln
>WENV181110786
OEEK01009753
280451
Bacteroidota
CGT
Thr
>WENV181110181
OEEK01001096
418894
Bacteroidota
TTC
Glu
>WENV181109801
OEEK01000219
99847
Bacteroidota
GTA
Tyr
>WENV181109918
OEEK01000365
99847
Bacteroidota
GTA
Tyr
>WENV181110206
OEEK01001193
99847
Bacteroidota
GTA
Tyr
>WENV181110404
OEEK01002421
99847
Bacteroidota
GTA
Tyr
>WENV181110498
OEEK01003606
99847
Bacteroidota
GTA
Tyr
>WENV181111657
OEEK01161145
99847
Bacteroidota
GTA
Tyr
>WENV181109663
OEEK01000063
399200
Bacteroidota
CAT
Met
>WENV181109664
OEEK01000063
399200
Bacteroidota
CAT
Met
>WENV181109993
OEEK01000504
399200
Bacteroidota
CAT
Met
>WENV181110016
OEEK01000543
399200
Bacteroidota
CAT
Met
>WENV181109855
OEEK01000284
186874
Bacteroidota
CAT
Met
>WENV181110839
OEEK01011802
186874
Bacteroidota
CAT
Met
>WENV181109578
OEEK01000019
332896
Bacteroidota
TTT
Lys
>WENV181109615
OEEK01000026
332896
Bacteroidota
TTT
Lys
>WENV181109661
OEEK01000058
332896
Bacteroidota
TTT
Lys
>WENV181110114
OEEK01000835
332896
Bacteroidota
TTT
Lys
>WENV181110152
OEEK01000988
332896
Bacteroidota
TTT
Lys
>WENV181110751
OEEK01008975
332896
Bacteroidota
TTT
Lys
>WENV181110207
OEEK01001195
488746
Bacteroidota
CTG
Gln
>WENV181110267
OEEK01001462
399026
Bacteroidota
CCT
Arg
>WENV181110121
OEEK01000844
280478
Bacteroidota
GCC
Gly
>WENV181110256
OEEK01001400
280478
Bacteroidota
GCC
Gly
>WENV181110348
OEEK01002019
280478
Bacteroidota
GCC
Gly
>WENV181110389
OEEK01002315
280478
Bacteroidota
GCC
Gly
>WENV181111651
OEEK01157315
280478
Bacteroidota
GCC
Gly
>WENV181110523
OEEK01003988
20766
Bacteroidota
GGA
Ser
>WENV181109884
OEEK01000321
186108
Bacteroidota
GTT
Asn
>WENV181110008
OEEK01000521
175844
Bacteroidota
GGC
Ala
>WENV181110496
OEEK01003592
175844
Bacteroidota
GGC
Ala
>WENV181110119
OEEK01000843
280532
Bacteroidota
>WENV181109782
OEEK01000174
229246
Bacteroidota
GGC
Ala
>WENV181109924
OEEK01000368
73011
Bacteroidota
CAA
Leu
>WENV181109765
OEEK01000156
280515
Bacteroidota
CCA
Trp
>WENV181110425
OEEK01002680
183889
Bacteroidota
GGC
Ala
>WENV181109831
OEEK01000255
480318
Bacteroidota
CTG
Gln
>WENV181109684
OEEK01000084
158068
Bacteroidota
GGG
Pro
>WENV181109750
OEEK01000144
158068
Bacteroidota
GGG
Pro
>WENV181110306
OEEK01001723
158068
Bacteroidota
GGG
Pro
>WENV181110759
OEEK01009190
158068
Bacteroidota
GGG
Pro
>WENV181111791
OEEK01241508
158068
Bacteroidota
GGG
Pro
>WENV181110897
OEEK01013888
186142
Bacteroidota
GAT
Ile
>WENV181110270
OEEK01001483
398828
Bacteroidota
CCG
Arg
>WENV181109726
OEEK01000118
74084
Bacteroidota
CAG
Leu
>WENV181111652
OEEK01157315
74084
Bacteroidota
CAG
Leu
>WENV181109638
OEEK01000043
159415
Bacteroidota
TAC
Val
>WENV181110279
OEEK01001543
159415
Bacteroidota
TAC
Val
>WENV181111482
OEEK01092107
159415
Bacteroidota
TAC
Val
>WENV181110039
OEEK01000594
480325
Bacteroidota
CTG
Gln
>WENV181110040
OEEK01000594
480325
Bacteroidota
CTG
Gln
>WENV181111762
OEEK01236420
140771
Bacteroidota
>WENV181109682
OEEK01000083
176192
Bacteroidota
TCT
Arg
>WENV181109872
OEEK01000305
176192
Bacteroidota
TCT
Arg
>WENV181111411
OEEK01071176
400088
Bacteroidota
GGT
Thr
>WENV181109554
OEEK01000005
280446
Bacteroidota
TTT
Lys
>WENV181109871
OEEK01000302
280446
Bacteroidota
TTT
Lys
>WENV181110224
OEEK01001245
280446
Bacteroidota
TTT
Lys
>WENV181110271
OEEK01001499
280446
Bacteroidota
TTT
Lys
>WENV181109891
OEEK01000341
484496
Bacteroidota
TTG
Gln
>WENV181110592
OEEK01005081
484496
Bacteroidota
TTG
Gln
>WENV181109818
OEEK01000231
285750
Bacteroidota
CCC
Gly
>WENV181110286
OEEK01001611
285750
Bacteroidota
CCC
Gly
>WENV181110243
OEEK01001324
188555
Bacteroidota
CAT
Met
>WENV181110469
OEEK01003000
117804
Bacteroidota
TAG
Leu
>WENV181110898
OEEK01013888
186143
Bacteroidota
TGC
Ala
>WENV181109733
OEEK01000127
398836
Bacteroidota
GCA
Cys
>WENV181109841
OEEK01000265
398836
Bacteroidota
GCA
Cys
>WENV181109867
OEEK01000296
398836
Bacteroidota
GCA
Cys
>WENV181110041
OEEK01000594
398836
Bacteroidota
GCA
Cys
>WENV181110197
OEEK01001163
398836
Bacteroidota
GCA
Cys
>WENV181110372
OEEK01002199
398836
Bacteroidota
GCA
Cys
>WENV181109640
OEEK01000046
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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