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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181261978
OFFY01000814
235097
Bacteroidota
TTT
Lys
>WENV181261826
OFFY01000430
95987
Bacteroidota
CAA
Leu
>WENV181262024
OFFY01000960
95987
Bacteroidota
CAA
Leu
>WENV181261956
OFFY01000754
235102
Bacteroidota
CGT
Thr
>WENV181261891
OFFY01000557
267954
Bacteroidota
GCC
Gly
>WENV181262279
OFFY01002725
267954
Bacteroidota
GCC
Gly
>WENV181262902
OFFY01067384
126966
Bacteroidota
TAC
Val
>WENV181262489
OFFY01006339
126965
Bacteroidota
GGG
Pro
>WENV181262862
OFFY01050247
338486
Bacteroidota
CAT
Met
>WENV181262235
OFFY01002265
415410
Bacteroidota
TTG
Gln
>WENV181262456
OFFY01005482
128251
Bacteroidota
TGG
Pro
>WENV181262123
OFFY01001547
127221
Bacteroidota
TAC
Val
>WENV181262159
OFFY01001690
155123
Bacteroidota
GTT
Asn
>WENV181261846
OFFY01000473
155123
Bacteroidota
GTT
Asn
>WENV181261631
OFFY01000034
155123
Bacteroidota
GTT
Asn
>WENV181261583
OFFY01000012
338124
Bacteroidota
CCG
Arg
>WENV181262529
OFFY01007635
235203
Bacteroidota
TTT
Lys
>WENV181262258
OFFY01002463
235203
Bacteroidota
TTT
Lys
>WENV181261940
OFFY01000707
235203
Bacteroidota
TTT
Lys
>WENV181261792
OFFY01000333
338132
Bacteroidota
GCA
Cys
>WENV181261745
OFFY01000221
303954
Bacteroidota
GCC
Gly
>WENV181261725
OFFY01000182
144656
Bacteroidota
GTG
His
>WENV181261782
OFFY01000311
235207
Bacteroidota
CAT
Met
>WENV181261593
OFFY01000022
80607
Bacteroidota
GTA
Tyr
>WENV181262069
OFFY01001179
52358
Bacteroidota
TGA
Ser
>WENV181261711
OFFY01000150
52358
Bacteroidota
TGA
Ser
>WENV181261966
OFFY01000781
95559
Bacteroidota
TAG
Leu
>WENV181261694
OFFY01000115
419272
Bacteroidota
CTG
Gln
>WENV181261620
OFFY01000029
144655
Bacteroidota
GGC
Ala
>WENV181261818
OFFY01000396
144639
Bacteroidota
GGC
Ala
>WENV181261689
OFFY01000104
144639
Bacteroidota
GGC
Ala
>WENV181261629
OFFY01000034
263771
Bacteroidota
CTT
Lys
>WENV181261834
OFFY01000447
151121
Bacteroidota
CAT
Met
>WENV181261794
OFFY01000335
151121
Bacteroidota
CAT
Met
>WENV181262759
OFFY01026977
354570
Bacteroidota
TTC
Glu
>WENV181261695
OFFY01000115
132360
Bacteroidota
GGG
Pro
>WENV181262766
OFFY01028688
425638
Bacteroidota
CTG
Gln
>WENV181262395
OFFY01004045
353927
Bacteroidota
TTC
Glu
>WENV181261964
OFFY01000774
353927
Bacteroidota
TTC
Glu
>WENV181261963
OFFY01000774
353927
Bacteroidota
TTC
Glu
>WENV181261662
OFFY01000058
16224
Bacteroidota
GGA
Ser
>WENV181262131
OFFY01001575
151960
Bacteroidota
GGC
Ala
>WENV181261974
OFFY01000785
151960
Bacteroidota
GGC
Ala
>WENV181261719
OFFY01000172
16220
Bacteroidota
GGA
Ser
>WENV181261674
OFFY01000082
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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