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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181333649
OFMB01000930
301449
Bacteroidota
CGG
Pro
>WENV181333679
OFMB01001298
338124
Bacteroidota
CCG
Arg
>WENV181333722
OFMB01001715
56823
Bacteroidota
TGA
Ser
>WENV181333781
OFMB01002239
436206
Bacteroidota
TTG
Gln
>WENV181333882
OFMB01004512
425638
Bacteroidota
CTG
Gln
>WENV181333892
OFMB01004814
16220
Bacteroidota
GGA
Ser
>WENV181333913
OFMB01005574
235207
Bacteroidota
CAT
Met
>WENV181333930
OFMB01006158
338125
Bacteroidota
CCT
Arg
>WENV181333934
OFMB01006205
144656
Bacteroidota
GTG
His
>WENV181333989
OFMB01008906
235102
Bacteroidota
CGT
Thr
>WENV181334006
OFMB01009947
413663
Bacteroidota
CTG
Gln
>WENV181334041
OFMB01011938
155123
Bacteroidota
GTT
Asn
>WENV181334069
OFMB01013356
193809
Bacteroidota
CAT
Met
>WENV181334107
OFMB01015643
144590
Bacteroidota
GTT
Asn
>WENV181334106
OFMB01015643
144590
Bacteroidota
GTT
Asn
>WENV181334221
OFMB01023288
412235
Bacteroidota
>WENV181334339
OFMB01042228
94703
Bacteroidota
GTA
Tyr
>WENV181334356
OFMB01045196
353927
Bacteroidota
TTC
Glu
>WENV181334359
OFMB01045478
16224
Bacteroidota
GGA
Ser
>WENV181334413
OFMB01054522
146764
Bacteroidota
GTC
Asp
>WENV181334438
OFMB01059342
414426
Bacteroidota
CTG
Gln
>WENV181334487
OFMB01076852
127023
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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