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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181456667
OGEH01000080
235182
Bacteroidota
>WENV181456669
OGEH01000081
80614
Bacteroidota
>WENV181456642
OGEH01000025
58714
Bacteroidota
CAA
Leu
>WENV181456677
OGEH01000111
59689
Bacteroidota
CAG
Leu
>WENV181456788
OGEH01000436
338486
Bacteroidota
CAT
Met
>WENV181456681
OGEH01000122
338486
Bacteroidota
CAT
Met
>WENV181456797
OGEH01000460
144688
Bacteroidota
CAT
Met
>WENV181456756
OGEH01000305
235207
Bacteroidota
CAT
Met
>WENV181456716
OGEH01000197
235207
Bacteroidota
CAT
Met
>WENV181456690
OGEH01000140
235180
Bacteroidota
CCA
Trp
>WENV181456653
OGEH01000041
240012
Bacteroidota
CCC
Gly
>WENV181456749
OGEH01000255
338124
Bacteroidota
CCG
Arg
>WENV181456646
OGEH01000032
343138
Bacteroidota
CCT
Arg
>WENV181456640
OGEH01000024
338314
Bacteroidota
CCT
Arg
>WENV181456772
OGEH01000396
338125
Bacteroidota
CCT
Arg
>WENV181456662
OGEH01000063
338125
Bacteroidota
CCT
Arg
>WENV181456689
OGEH01000140
144657
Bacteroidota
CGG
Pro
>WENV181456796
OGEH01000454
235102
Bacteroidota
CGT
Thr
>WENV181456708
OGEH01000176
272983
Bacteroidota
CGT
Thr
>WENV181456603
OGEH01000001
411543
Bacteroidota
CTG
Gln
>WENV181456670
OGEH01000090
419272
Bacteroidota
CTG
Gln
>WENV181456620
OGEH01000008
411550
Bacteroidota
CTG
Gln
>WENV181456655
OGEH01000052
238121
Bacteroidota
CTT
Lys
>WENV181456643
OGEH01000026
58715
Bacteroidota
GAG
Leu
>WENV181456660
OGEH01000060
338132
Bacteroidota
GCA
Cys
>WENV181456664
OGEH01000070
235129
Bacteroidota
GCC
Gly
>WENV181456752
OGEH01000258
23696
Bacteroidota
GCT
Ser
>WENV181456630
OGEH01000012
19317
Bacteroidota
GGA
Ser
>WENV181456928
OGEH01001691
16224
Bacteroidota
GGA
Ser
>WENV181456859
OGEH01000896
16220
Bacteroidota
GGA
Ser
>WENV181456637
OGEH01000020
181746
Bacteroidota
GGC
Ala
>WENV181456802
OGEH01000476
144655
Bacteroidota
GGC
Ala
>WENV181456850
OGEH01000762
132360
Bacteroidota
GGG
Pro
>WENV181456760
OGEH01000331
132360
Bacteroidota
GGG
Pro
>WENV181456671
OGEH01000090
132360
Bacteroidota
GGG
Pro
>WENV181456602
OGEH01000001
132360
Bacteroidota
GGG
Pro
>WENV181456604
OGEH01000002
339341
Bacteroidota
GGT
Thr
>WENV181456795
OGEH01000452
80607
Bacteroidota
GTA
Tyr
>WENV181456769
OGEH01000384
80607
Bacteroidota
GTA
Tyr
>WENV181456748
OGEH01000252
80607
Bacteroidota
GTA
Tyr
>WENV181457051
OGEH01005276
144656
Bacteroidota
GTG
His
>WENV181456668
OGEH01000081
144659
Bacteroidota
GTG
His
>WENV181457177
OGEH01014571
144590
Bacteroidota
GTT
Asn
>WENV181456652
OGEH01000040
150485
Bacteroidota
GTT
Asn
>WENV181456673
OGEH01000101
95618
Bacteroidota
TAG
Leu
>WENV181456641
OGEH01000025
95875
Bacteroidota
TAG
Leu
>WENV181456887
OGEH01001154
144933
Bacteroidota
TCT
Arg
>WENV181456657
OGEH01000055
147439
Bacteroidota
TCT
Arg
>WENV181457093
OGEH01006752
46165
Bacteroidota
TGA
Ser
>WENV181456881
OGEH01001092
48053
Bacteroidota
TGA
Ser
>WENV181456762
OGEH01000354
48053
Bacteroidota
TGA
Ser
>WENV181456704
OGEH01000169
48053
Bacteroidota
TGA
Ser
>WENV181456666
OGEH01000077
48053
Bacteroidota
TGA
Ser
>WENV181456656
OGEH01000052
45423
Bacteroidota
TGA
Ser
>WENV181456645
OGEH01000032
338164
Bacteroidota
TTC
Glu
>WENV181456981
OGEH01002866
415410
Bacteroidota
TTG
Gln
>WENV181456800
OGEH01000470
415410
Bacteroidota
TTG
Gln
>WENV181456697
OGEH01000162
411629
Bacteroidota
TTG
Gln
>WENV181456886
OGEH01001142
235097
Bacteroidota
TTT
Lys
>WENV181456649
OGEH01000036
235203
Bacteroidota
TTT
Lys
>WENV181456632
OGEH01000014
235203
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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