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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181498754
OGGG01000002
398829
Bacteroidota
CCT
Arg
>WENV181498758
OGGG01000003
20206
Bacteroidota
GGA
Ser
>WENV181498755
OGGG01000003
174201
Bacteroidota
GGG
Pro
>WENV181498757
OGGG01000003
488746
Bacteroidota
CTG
Gln
>WENV181498756
OGGG01000003
280446
Bacteroidota
TTT
Lys
>WENV181498767
OGGG01000005
27524
Bacteroidota
GGA
Ser
>WENV181498768
OGGG01000006
280451
Bacteroidota
CGT
Thr
>WENV181498771
OGGG01000007
169545
Bacteroidota
TGG
Pro
>WENV181498769
OGGG01000007
176192
Bacteroidota
TCT
Arg
>WENV181498812
OGGG01000015
175838
Bacteroidota
GTT
Asn
>WENV181498813
OGGG01000015
175838
Bacteroidota
GTT
Asn
>WENV181498811
OGGG01000015
56072
Bacteroidota
TAA
Leu
>WENV181498820
OGGG01000021
365112
Bacteroidota
TTT
Lys
>WENV181498823
OGGG01000024
398836
Bacteroidota
GCA
Cys
>WENV181498826
OGGG01000025
203954
Bacteroidota
GTC
Asp
>WENV181498867
OGGG01000040
99847
Bacteroidota
GTA
Tyr
>WENV181498869
OGGG01000041
175902
Bacteroidota
GGC
Ala
>WENV181498870
OGGG01000042
69204
Bacteroidota
TGA
Ser
>WENV181498873
OGGG01000044
404226
Bacteroidota
CCT
Arg
>WENV181498875
OGGG01000044
398871
Bacteroidota
TTC
Glu
>WENV181498876
OGGG01000047
117804
Bacteroidota
TAG
Leu
>WENV181498899
OGGG01000063
398836
Bacteroidota
GCA
Cys
>WENV181498907
OGGG01000068
175903
Bacteroidota
GTG
His
>WENV181498908
OGGG01000068
27502
Bacteroidota
GGA
Ser
>WENV181498930
OGGG01000100
99847
Bacteroidota
GTA
Tyr
>WENV181498935
OGGG01000109
174201
Bacteroidota
GGG
Pro
>WENV181498944
OGGG01000116
69204
Bacteroidota
TGA
Ser
>WENV181498948
OGGG01000123
280446
Bacteroidota
TTT
Lys
>WENV181498949
OGGG01000124
484496
Bacteroidota
TTG
Gln
>WENV181498950
OGGG01000125
74084
Bacteroidota
CAG
Leu
>WENV181498955
OGGG01000129
280532
Bacteroidota
>WENV181498957
OGGG01000132
229246
Bacteroidota
GGC
Ala
>WENV181498958
OGGG01000133
399200
Bacteroidota
CAT
Met
>WENV181498970
OGGG01000149
56072
Bacteroidota
TAA
Leu
>WENV181498976
OGGG01000158
186874
Bacteroidota
CAT
Met
>WENV181498984
OGGG01000172
174201
Bacteroidota
GGG
Pro
>WENV181498991
OGGG01000186
480325
Bacteroidota
CTG
Gln
>WENV181498995
OGGG01000197
117741
Bacteroidota
TAG
Leu
>WENV181499015
OGGG01000229
405877
Bacteroidota
GGT
Thr
>WENV181499028
OGGG01000265
280446
Bacteroidota
TTT
Lys
>WENV181499059
OGGG01000343
280557
Bacteroidota
CAT
Met
>WENV181499073
OGGG01000382
20449
Bacteroidota
GGA
Ser
>WENV181499083
OGGG01000407
117741
Bacteroidota
TAG
Leu
>WENV181499100
OGGG01000444
365112
Bacteroidota
TTT
Lys
>WENV181499102
OGGG01000449
21127
Bacteroidota
GGA
Ser
>WENV181499104
OGGG01000455
280530
Bacteroidota
CCA
Trp
>WENV181499111
OGGG01000480
480404
Bacteroidota
TTG
Gln
>WENV181499113
OGGG01000485
280478
Bacteroidota
GCC
Gly
>WENV181499160
OGGG01000602
398828
Bacteroidota
CCG
Arg
>WENV181499188
OGGG01000706
280446
Bacteroidota
TTT
Lys
>WENV181499192
OGGG01000744
280557
Bacteroidota
CAT
Met
>WENV181499198
OGGG01000763
174201
Bacteroidota
GGG
Pro
>WENV181499205
OGGG01000792
398836
Bacteroidota
GCA
Cys
>WENV181499207
OGGG01000808
322836
Bacteroidota
CGT
Thr
>WENV181499222
OGGG01000856
280557
Bacteroidota
CAT
Met
>WENV181499230
OGGG01000907
56493
Bacteroidota
TGA
Ser
>WENV181499233
OGGG01000915
399026
Bacteroidota
CCT
Arg
>WENV181499246
OGGG01000961
285750
Bacteroidota
CCC
Gly
>WENV181499248
OGGG01000977
398836
Bacteroidota
GCA
Cys
>WENV181499257
OGGG01000998
175936
Bacteroidota
CAT
Met
>WENV181499263
OGGG01001023
480318
Bacteroidota
CTG
Gln
>WENV181499300
OGGG01001206
291612
Bacteroidota
>WENV181499313
OGGG01001299
118089
Bacteroidota
TAG
Leu
>WENV181499314
OGGG01001303
175906
Bacteroidota
GTG
His
>WENV181499348
OGGG01001465
69204
Bacteroidota
TGA
Ser
>WENV181499379
OGGG01001782
178907
Bacteroidota
TCT
Arg
>WENV181499380
OGGG01001794
182267
Bacteroidota
GTT
Asn
>WENV181499381
OGGG01001794
182267
Bacteroidota
GTT
Asn
>WENV181499382
OGGG01001794
182267
Bacteroidota
GTT
Asn
>WENV181499391
OGGG01001890
483416
Bacteroidota
CTG
Gln
>WENV181499415
OGGG01002063
398836
Bacteroidota
GCA
Cys
>WENV181499423
OGGG01002126
289031
Bacteroidota
CAT
Met
>WENV181499433
OGGG01002235
484496
Bacteroidota
TTG
Gln
>WENV181499449
OGGG01002391
399200
Bacteroidota
CAT
Met
>WENV181499480
OGGG01002750
351598
Bacteroidota
CGG
Pro
>WENV181499486
OGGG01002801
398829
Bacteroidota
CCT
Arg
>WENV181499506
OGGG01003078
186108
Bacteroidota
GTT
Asn
>WENV181499507
OGGG01003078
186108
Bacteroidota
GTT
Asn
>WENV181499547
OGGG01003665
69204
Bacteroidota
TGA
Ser
>WENV181499612
OGGG01005275
175904
Bacteroidota
CGG
Pro
>WENV181499646
OGGG01006411
99847
Bacteroidota
GTA
Tyr
>WENV181499714
OGGG01009380
365112
Bacteroidota
TTT
Lys
>WENV181499806
OGGG01018866
285360
Bacteroidota
TTT
Lys
>WENV181499816
OGGG01020162
176192
Bacteroidota
TCT
Arg
>WENV181499904
OGGG01045031
57645
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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