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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181530290
OGHN01008694
95987
Bacteroidota
CAA
Leu
>WENV181529860
OGHN01000003
235102
Bacteroidota
CGT
Thr
>WENV181530222
OGHN01005129
267954
Bacteroidota
GCC
Gly
>WENV181529916
OGHN01000109
243025
Bacteroidota
CAT
Met
>WENV181530015
OGHN01000619
243025
Bacteroidota
CAT
Met
>WENV181530189
OGHN01003944
338155
Bacteroidota
CTC
Glu
>WENV181530287
OGHN01008488
153993
Bacteroidota
GAT
Ile
>WENV181530462
OGHN01033690
343138
Bacteroidota
CCT
Arg
>WENV181530308
OGHN01008990
46165
Bacteroidota
TGA
Ser
>WENV181530032
OGHN01000721
394247
Bacteroidota
CTC
Glu
>WENV181529874
OGHN01000021
436206
Bacteroidota
TTG
Gln
>WENV181530342
OGHN01012410
412479
Bacteroidota
TTG
Gln
>WENV181530043
OGHN01000847
338124
Bacteroidota
CCG
Arg
>WENV181529928
OGHN01000155
146800
Bacteroidota
>WENV181530465
OGHN01035217
235203
Bacteroidota
TTT
Lys
>WENV181530293
OGHN01008857
338132
Bacteroidota
GCA
Cys
>WENV181529978
OGHN01000385
338132
Bacteroidota
GCA
Cys
>WENV181530267
OGHN01007025
37076
Bacteroidota
TAA
Leu
>WENV181530080
OGHN01001410
37076
Bacteroidota
TAA
Leu
>WENV181530026
OGHN01000679
301449
Bacteroidota
CGG
Pro
>WENV181530370
OGHN01017510
144933
Bacteroidota
TCT
Arg
>WENV181530313
OGHN01009389
144656
Bacteroidota
GTG
His
>WENV181530171
OGHN01003375
144596
Bacteroidota
GGC
Ala
>WENV181530221
OGHN01005077
80607
Bacteroidota
GTA
Tyr
>WENV181530197
OGHN01004090
80614
Bacteroidota
>WENV181529923
OGHN01000128
154643
Bacteroidota
CAT
Met
>WENV181530420
OGHN01025879
175704
Bacteroidota
TGC
Ala
>WENV181530013
OGHN01000582
144590
Bacteroidota
GTT
Asn
>WENV181529919
OGHN01000114
95559
Bacteroidota
TAG
Leu
>WENV181529899
OGHN01000074
419272
Bacteroidota
CTG
Gln
>WENV181529886
OGHN01000051
144655
Bacteroidota
GGC
Ala
>WENV181530286
OGHN01008388
338164
Bacteroidota
TTC
Glu
>WENV181530403
OGHN01022631
151121
Bacteroidota
CAT
Met
>WENV181530196
OGHN01004049
139743
Bacteroidota
GGG
Pro
>WENV181529995
OGHN01000477
139743
Bacteroidota
GGG
Pro
>WENV181529968
OGHN01000329
139743
Bacteroidota
GGG
Pro
>WENV181529898
OGHN01000074
139743
Bacteroidota
GGG
Pro
>WENV181529962
OGHN01000272
44852
Bacteroidota
TAA
Leu
>WENV181530404
OGHN01022751
147439
Bacteroidota
TCT
Arg
>WENV181530374
OGHN01018088
280513
Bacteroidota
TTT
Lys
>WENV181530322
OGHN01009947
150485
Bacteroidota
GTT
Asn
>WENV181530061
OGHN01001067
150485
Bacteroidota
GTT
Asn
>WENV181530425
OGHN01027419
411550
Bacteroidota
CTG
Gln
>WENV181530155
OGHN01002649
425638
Bacteroidota
CTG
Gln
>WENV181530093
OGHN01001498
425638
Bacteroidota
CTG
Gln
>WENV181530116
OGHN01001859
19317
Bacteroidota
GGA
Ser
>WENV181529988
OGHN01000447
353927
Bacteroidota
TTC
Glu
>WENV181529868
OGHN01000014
414426
Bacteroidota
CTG
Gln
>WENV181530098
OGHN01001575
55270
Bacteroidota
TGA
Ser
>WENV181529955
OGHN01000244
55270
Bacteroidota
TGA
Ser
>WENV181529924
OGHN01000139
55270
Bacteroidota
TGA
Ser
>WENV181530145
OGHN01002431
16224
Bacteroidota
GGA
Ser
>WENV181529920
OGHN01000121
16224
Bacteroidota
GGA
Ser
>WENV181529934
OGHN01000185
16220
Bacteroidota
GGA
Ser
>WENV181529897
OGHN01000069
338125
Bacteroidota
CCT
Arg
>WENV181530484
OGHN01044876
235129
Bacteroidota
GCC
Gly
>WENV181530198
OGHN01004186
313363
Bacteroidota
GAA
Phe
>WENV181530090
OGHN01001455
313363
Bacteroidota
GAA
Phe
>WENV181530036
OGHN01000792
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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