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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181538864
OGHZ01000058
341950
Bacteroidota
>WENV181539307
OGHZ01013697
412235
Bacteroidota
>WENV181539315
OGHZ01015098
80614
Bacteroidota
>WENV181539290
OGHZ01010893
95987
Bacteroidota
CAA
Leu
>WENV181539348
OGHZ01023511
119518
Bacteroidota
CAG
Leu
>WENV181538899
OGHZ01000105
243025
Bacteroidota
CAT
Met
>WENV181539297
OGHZ01011899
338486
Bacteroidota
CAT
Met
>WENV181539352
OGHZ01023768
238811
Bacteroidota
CAT
Met
>WENV181538891
OGHZ01000089
235207
Bacteroidota
CAT
Met
>WENV181539198
OGHZ01003913
147148
Bacteroidota
CAT
Met
>WENV181538913
OGHZ01000149
338124
Bacteroidota
CCG
Arg
>WENV181538839
OGHZ01000035
343138
Bacteroidota
CCT
Arg
>WENV181539055
OGHZ01000729
338125
Bacteroidota
CCT
Arg
>WENV181538923
OGHZ01000164
338125
Bacteroidota
CCT
Arg
>WENV181539291
OGHZ01010907
238606
Bacteroidota
CGG
Pro
>WENV181539020
OGHZ01000477
235102
Bacteroidota
CGT
Thr
>WENV181538915
OGHZ01000151
338155
Bacteroidota
CTC
Glu
>WENV181539085
OGHZ01001060
419272
Bacteroidota
CTG
Gln
>WENV181539257
OGHZ01006827
412423
Bacteroidota
CTG
Gln
>WENV181539184
OGHZ01003300
238121
Bacteroidota
CTT
Lys
>WENV181539349
OGHZ01023511
59182
Bacteroidota
GAG
Leu
>WENV181539051
OGHZ01000706
338132
Bacteroidota
GCA
Cys
>WENV181538982
OGHZ01000355
338132
Bacteroidota
GCA
Cys
>WENV181539258
OGHZ01006909
235129
Bacteroidota
GCC
Gly
>WENV181538914
OGHZ01000151
23696
Bacteroidota
GCT
Ser
>WENV181538836
OGHZ01000033
16224
Bacteroidota
GGA
Ser
>WENV181538939
OGHZ01000218
16220
Bacteroidota
GGA
Ser
>WENV181538980
OGHZ01000347
144596
Bacteroidota
GGC
Ala
>WENV181539046
OGHZ01000658
144655
Bacteroidota
GGC
Ala
>WENV181538985
OGHZ01000365
151960
Bacteroidota
GGC
Ala
>WENV181539033
OGHZ01000606
132360
Bacteroidota
GGG
Pro
>WENV181538848
OGHZ01000038
132360
Bacteroidota
GGG
Pro
>WENV181539031
OGHZ01000588
80607
Bacteroidota
GTA
Tyr
>WENV181538906
OGHZ01000120
80607
Bacteroidota
GTA
Tyr
>WENV181538969
OGHZ01000294
144656
Bacteroidota
GTG
His
>WENV181539215
OGHZ01004807
155123
Bacteroidota
GTT
Asn
>WENV181538951
OGHZ01000245
126641
Bacteroidota
TAC
Val
>WENV181539018
OGHZ01000472
95559
Bacteroidota
TAG
Leu
>WENV181538930
OGHZ01000195
144933
Bacteroidota
TCT
Arg
>WENV181539185
OGHZ01003300
46165
Bacteroidota
TGA
Ser
>WENV181539196
OGHZ01003803
48053
Bacteroidota
TGA
Ser
>WENV181539272
OGHZ01008226
339996
Bacteroidota
TTC
Glu
>WENV181539008
OGHZ01000444
415410
Bacteroidota
TTG
Gln
>WENV181539341
OGHZ01018654
415558
Bacteroidota
TTG
Gln
>WENV181538830
OGHZ01000029
239647
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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