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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181540838
OGIC01000021
235097
Bacteroidota
TTT
Lys
>WENV181540940
OGIC01000196
235097
Bacteroidota
TTT
Lys
>WENV181541059
OGIC01001039
235097
Bacteroidota
TTT
Lys
>WENV181541007
OGIC01000450
235102
Bacteroidota
CGT
Thr
>WENV181540926
OGIC01000156
338155
Bacteroidota
CTC
Glu
>WENV181541256
OGIC01007545
343138
Bacteroidota
CCT
Arg
>WENV181541188
OGIC01004063
58715
Bacteroidota
GAG
Leu
>WENV181541297
OGIC01011313
46165
Bacteroidota
TGA
Ser
>WENV181540893
OGIC01000102
95618
Bacteroidota
TAG
Leu
>WENV181541176
OGIC01003436
338486
Bacteroidota
CAT
Met
>WENV181540855
OGIC01000037
411543
Bacteroidota
CTG
Gln
>WENV181541377
OGIC01024679
237797
Bacteroidota
CCA
Trp
>WENV181541219
OGIC01004760
59689
Bacteroidota
CAG
Leu
>WENV181541012
OGIC01000508
436206
Bacteroidota
TTG
Gln
>WENV181540954
OGIC01000256
436206
Bacteroidota
TTG
Gln
>WENV181540851
OGIC01000031
436206
Bacteroidota
TTG
Gln
>WENV181541117
OGIC01002014
20893
Bacteroidota
GGA
Ser
>WENV181541251
OGIC01007095
412479
Bacteroidota
TTG
Gln
>WENV181540932
OGIC01000169
235182
Bacteroidota
>WENV181541042
OGIC01000853
272983
Bacteroidota
CGT
Thr
>WENV181540850
OGIC01000030
338124
Bacteroidota
CCG
Arg
>WENV181541046
OGIC01000895
235203
Bacteroidota
TTT
Lys
>WENV181541246
OGIC01006808
238121
Bacteroidota
CTT
Lys
>WENV181540848
OGIC01000027
126641
Bacteroidota
TAC
Val
>WENV181540847
OGIC01000027
126641
Bacteroidota
TAC
Val
>WENV181540902
OGIC01000116
338132
Bacteroidota
GCA
Cys
>WENV181540900
OGIC01000109
338132
Bacteroidota
GCA
Cys
>WENV181540860
OGIC01000045
338132
Bacteroidota
GCA
Cys
>WENV181540989
OGIC01000399
144688
Bacteroidota
CAT
Met
>WENV181541258
OGIC01007666
45423
Bacteroidota
TGA
Ser
>WENV181540889
OGIC01000094
193809
Bacteroidota
CAT
Met
>WENV181540872
OGIC01000063
181746
Bacteroidota
GGC
Ala
>WENV181541050
OGIC01000926
301449
Bacteroidota
CGG
Pro
>WENV181540981
OGIC01000342
301449
Bacteroidota
CGG
Pro
>WENV181540881
OGIC01000081
144933
Bacteroidota
TCT
Arg
>WENV181540965
OGIC01000262
144933
Bacteroidota
TCT
Arg
>WENV181540977
OGIC01000310
144933
Bacteroidota
TCT
Arg
>WENV181540918
OGIC01000143
144656
Bacteroidota
GTG
His
>WENV181540984
OGIC01000362
235207
Bacteroidota
CAT
Met
>WENV181540888
OGIC01000092
235207
Bacteroidota
CAT
Met
>WENV181540891
OGIC01000095
143169
Bacteroidota
GGG
Pro
>WENV181540854
OGIC01000037
143169
Bacteroidota
GGG
Pro
>WENV181541083
OGIC01001314
144659
Bacteroidota
GTG
His
>WENV181541178
OGIC01003541
235180
Bacteroidota
CCA
Trp
>WENV181541048
OGIC01000921
144596
Bacteroidota
GGC
Ala
>WENV181540945
OGIC01000225
80607
Bacteroidota
GTA
Tyr
>WENV181540997
OGIC01000421
113604
Bacteroidota
>WENV181540994
OGIC01000421
113604
Bacteroidota
>WENV181540808
OGIC01000005
16999
Bacteroidota
GGA
Ser
>WENV181541175
OGIC01003427
80614
Bacteroidota
>WENV181540871
OGIC01000062
95559
Bacteroidota
TAG
Leu
>WENV181540933
OGIC01000176
144655
Bacteroidota
GGC
Ala
>WENV181541024
OGIC01000604
95875
Bacteroidota
TAG
Leu
>WENV181540979
OGIC01000334
338314
Bacteroidota
CCT
Arg
>WENV181540845
OGIC01000025
44852
Bacteroidota
TAA
Leu
>WENV181541186
OGIC01003943
147439
Bacteroidota
TCT
Arg
>WENV181541034
OGIC01000752
425638
Bacteroidota
CTG
Gln
>WENV181541009
OGIC01000469
425638
Bacteroidota
CTG
Gln
>WENV181540967
OGIC01000272
425638
Bacteroidota
CTG
Gln
>WENV181540806
OGIC01000004
239647
Bacteroidota
TTT
Lys
>WENV181541090
OGIC01001407
94703
Bacteroidota
GTA
Tyr
>WENV181540906
OGIC01000127
94703
Bacteroidota
GTA
Tyr
>WENV181540901
OGIC01000110
94703
Bacteroidota
GTA
Tyr
>WENV181540865
OGIC01000055
185921
Bacteroidota
GTC
Asp
>WENV181540939
OGIC01000186
139062
Bacteroidota
TGG
Pro
>WENV181540856
OGIC01000038
56823
Bacteroidota
TGA
Ser
>WENV181540853
OGIC01000033
56823
Bacteroidota
TGA
Ser
>WENV181540974
OGIC01000287
16224
Bacteroidota
GGA
Ser
>WENV181541013
OGIC01000519
16220
Bacteroidota
GGA
Ser
>WENV181541080
OGIC01001180
338125
Bacteroidota
CCT
Arg
>WENV181540876
OGIC01000068
338125
Bacteroidota
CCT
Arg
>WENV181540843
OGIC01000025
338125
Bacteroidota
CCT
Arg
>WENV181541147
OGIC01002828
235129
Bacteroidota
GCC
Gly
>WENV181541032
OGIC01000733
411629
Bacteroidota
TTG
Gln
>WENV181540862
OGIC01000048
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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