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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181552669
OGIP01000005
280557
Bacteroidota
CAT
Met
>WENV181552672
OGIP01000008
99847
Bacteroidota
GTA
Tyr
>WENV181552674
OGIP01000009
280446
Bacteroidota
TTT
Lys
>WENV181552675
OGIP01000012
175903
Bacteroidota
GTG
His
>WENV181552677
OGIP01000018
488746
Bacteroidota
CTG
Gln
>WENV181552678
OGIP01000018
20206
Bacteroidota
GGA
Ser
>WENV181552679
OGIP01000022
398828
Bacteroidota
CCG
Arg
>WENV181552681
OGIP01000027
56493
Bacteroidota
TGA
Ser
>WENV181552691
OGIP01000055
280451
Bacteroidota
CGT
Thr
>WENV181552696
OGIP01000081
56072
Bacteroidota
TAA
Leu
>WENV181552699
OGIP01000103
117741
Bacteroidota
TAG
Leu
>WENV181552702
OGIP01000122
158068
Bacteroidota
GGG
Pro
>WENV181552703
OGIP01000133
484496
Bacteroidota
TTG
Gln
>WENV181552710
OGIP01000412
175902
Bacteroidota
GGC
Ala
>WENV181552714
OGIP01000597
57807
Bacteroidota
TGA
Ser
>WENV181552734
OGIP01001446
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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