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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181591415
OGKP01000028
95987
Bacteroidota
CAA
Leu
>WENV181591405
OGKP01000018
339412
Bacteroidota
GGT
Thr
>WENV181591398
OGKP01000011
394247
Bacteroidota
CTC
Glu
>WENV181591399
OGKP01000011
394247
Bacteroidota
CTC
Glu
>WENV181591391
OGKP01000004
413663
Bacteroidota
CTG
Gln
>WENV181591392
OGKP01000004
413663
Bacteroidota
CTG
Gln
>WENV181591427
OGKP01000051
136244
Bacteroidota
TAC
Val
>WENV181591406
OGKP01000018
237797
Bacteroidota
CCA
Trp
>WENV181591393
OGKP01000006
412479
Bacteroidota
TTG
Gln
>WENV181591401
OGKP01000015
147147
Bacteroidota
GTG
His
>WENV181591394
OGKP01000006
37076
Bacteroidota
TAA
Leu
>WENV181591433
OGKP01000060
196394
Bacteroidota
GTC
Asp
>WENV181591428
OGKP01000053
196394
Bacteroidota
GTC
Asp
>WENV181591412
OGKP01000024
313363
Bacteroidota
GAA
Phe
>WENV181591390
OGKP01000001
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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