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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181617505
OGMB01000030
398836
Bacteroidota
GCA
Cys
>WENV181617515
OGMB01000042
280451
Bacteroidota
CGT
Thr
>WENV181617529
OGMB01000070
182267
Bacteroidota
GTT
Asn
>WENV181617530
OGMB01000071
280557
Bacteroidota
CAT
Met
>WENV181617568
OGMB01000115
46648
Bacteroidota
TAA
Leu
>WENV181617570
OGMB01000115
481328
Bacteroidota
TTG
Gln
>WENV181617580
OGMB01000150
118221
Bacteroidota
CAA
Leu
>WENV181617583
OGMB01000164
56493
Bacteroidota
TGA
Ser
>WENV181617587
OGMB01000170
398828
Bacteroidota
CCG
Arg
>WENV181617604
OGMB01000217
404109
Bacteroidota
CTC
Glu
>WENV181617605
OGMB01000217
404109
Bacteroidota
CTC
Glu
>WENV181617623
OGMB01000285
56493
Bacteroidota
TGA
Ser
>WENV181617634
OGMB01000317
56072
Bacteroidota
TAA
Leu
>WENV181617637
OGMB01000322
186874
Bacteroidota
CAT
Met
>WENV181617657
OGMB01000381
56385
Bacteroidota
TGA
Ser
>WENV181617659
OGMB01000384
280557
Bacteroidota
CAT
Met
>WENV181617734
OGMB01000799
280553
Bacteroidota
TTT
Lys
>WENV181617737
OGMB01000817
280553
Bacteroidota
TTT
Lys
>WENV181617747
OGMB01000871
175903
Bacteroidota
GTG
His
>WENV181617768
OGMB01001018
400161
Bacteroidota
GGT
Thr
>WENV181617775
OGMB01001122
187814
Bacteroidota
GTC
Asp
>WENV181617776
OGMB01001122
187814
Bacteroidota
GTC
Asp
>WENV181617797
OGMB01001297
280451
Bacteroidota
CGT
Thr
>WENV181617810
OGMB01001419
280553
Bacteroidota
TTT
Lys
>WENV181617821
OGMB01001490
187400
Bacteroidota
GTT
Asn
>WENV181617822
OGMB01001490
187400
Bacteroidota
GTT
Asn
>WENV181617845
OGMB01001631
57807
Bacteroidota
TGA
Ser
>WENV181618037
OGMB01005013
175838
Bacteroidota
GTT
Asn
>WENV181618038
OGMB01005013
175838
Bacteroidota
GTT
Asn
>WENV181618040
OGMB01005058
99847
Bacteroidota
GTA
Tyr
>WENV181618082
OGMB01006481
178133
Bacteroidota
GAT
Ile
>WENV181618086
OGMB01006838
175902
Bacteroidota
GGC
Ala
>WENV181618126
OGMB01009848
280515
Bacteroidota
CCA
Trp
>WENV181618129
OGMB01010179
179697
Bacteroidota
TGT
Thr
>WENV181618134
OGMB01010750
156422
Bacteroidota
TAC
Val
>WENV181618138
OGMB01010884
480318
Bacteroidota
CTG
Gln
>WENV181618144
OGMB01011113
20206
Bacteroidota
GGA
Ser
>WENV181618166
OGMB01012774
140771
Bacteroidota
>WENV181618241
OGMB01024944
175886
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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