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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181764453
OGQY01000001
351598
Bacteroidota
CGG
Pro
>WENV181764470
OGQY01000005
175903
Bacteroidota
GTG
His
>WENV181764469
OGQY01000005
69204
Bacteroidota
TGA
Ser
>WENV181764471
OGQY01000005
27502
Bacteroidota
GGA
Ser
>WENV181764487
OGQY01000012
99847
Bacteroidota
GTA
Tyr
>WENV181764490
OGQY01000013
351598
Bacteroidota
CGG
Pro
>WENV181764509
OGQY01000024
172207
Bacteroidota
GGG
Pro
>WENV181764508
OGQY01000024
20206
Bacteroidota
GGA
Ser
>WENV181764507
OGQY01000024
488746
Bacteroidota
CTG
Gln
>WENV181764510
OGQY01000025
201819
Bacteroidota
CAT
Met
>WENV181764512
OGQY01000027
280446
Bacteroidota
TTT
Lys
>WENV181764518
OGQY01000035
56072
Bacteroidota
TAA
Leu
>WENV181764604
OGQY01000107
175902
Bacteroidota
GGC
Ala
>WENV181764606
OGQY01000111
117741
Bacteroidota
TAG
Leu
>WENV181764612
OGQY01000114
186874
Bacteroidota
CAT
Met
>WENV181764630
OGQY01000138
229246
Bacteroidota
GGC
Ala
>WENV181764643
OGQY01000165
398836
Bacteroidota
GCA
Cys
>WENV181764668
OGQY01000226
289031
Bacteroidota
CAT
Met
>WENV181764722
OGQY01000382
480404
Bacteroidota
TTG
Gln
>WENV181764767
OGQY01000593
280557
Bacteroidota
CAT
Met
>WENV181764790
OGQY01000674
99847
Bacteroidota
GTA
Tyr
>WENV181764795
OGQY01000698
20449
Bacteroidota
GGA
Ser
>WENV181764796
OGQY01000699
280451
Bacteroidota
CGT
Thr
>WENV181764889
OGQY01001216
186108
Bacteroidota
GTT
Asn
>WENV181764894
OGQY01001226
398860
Bacteroidota
CTC
Glu
>WENV181764908
OGQY01001271
295385
Bacteroidota
CCA
Trp
>WENV181764924
OGQY01001400
69204
Bacteroidota
TGA
Ser
>WENV181764928
OGQY01001426
398828
Bacteroidota
CCG
Arg
>WENV181764930
OGQY01001441
280557
Bacteroidota
CAT
Met
>WENV181764946
OGQY01001548
483416
Bacteroidota
CTG
Gln
>WENV181764967
OGQY01001708
27502
Bacteroidota
GGA
Ser
>WENV181764986
OGQY01001927
117804
Bacteroidota
TAG
Leu
>WENV181764991
OGQY01001982
351598
Bacteroidota
CGG
Pro
>WENV181765007
OGQY01002151
118089
Bacteroidota
TAG
Leu
>WENV181765012
OGQY01002202
159415
Bacteroidota
TAC
Val
>WENV181765022
OGQY01002367
351598
Bacteroidota
CGG
Pro
>WENV181765033
OGQY01002560
398836
Bacteroidota
GCA
Cys
>WENV181765051
OGQY01002730
285750
Bacteroidota
CCC
Gly
>WENV181765054
OGQY01002763
484496
Bacteroidota
TTG
Gln
>WENV181765068
OGQY01002981
56493
Bacteroidota
TGA
Ser
>WENV181765073
OGQY01003079
175904
Bacteroidota
CGG
Pro
>WENV181765088
OGQY01003236
176192
Bacteroidota
TCT
Arg
>WENV181765093
OGQY01003362
175936
Bacteroidota
CAT
Met
>WENV181765107
OGQY01003651
483416
Bacteroidota
CTG
Gln
>WENV181765122
OGQY01003873
99847
Bacteroidota
GTA
Tyr
>WENV181765161
OGQY01004586
418894
Bacteroidota
TTC
Glu
>WENV181765162
OGQY01004603
365112
Bacteroidota
TTT
Lys
>WENV181765213
OGQY01005609
399200
Bacteroidota
CAT
Met
>WENV181765219
OGQY01005835
480318
Bacteroidota
CTG
Gln
>WENV181765229
OGQY01005964
291612
Bacteroidota
>WENV181765235
OGQY01006217
182267
Bacteroidota
GTT
Asn
>WENV181765236
OGQY01006293
399026
Bacteroidota
CCT
Arg
>WENV181765248
OGQY01006791
21127
Bacteroidota
GGA
Ser
>WENV181765315
OGQY01009376
175844
Bacteroidota
GGC
Ala
>WENV181765333
OGQY01010197
289031
Bacteroidota
CAT
Met
>WENV181765390
OGQY01012577
480404
Bacteroidota
TTG
Gln
>WENV181765407
OGQY01013144
280478
Bacteroidota
GCC
Gly
>WENV181765418
OGQY01013824
176192
Bacteroidota
TCT
Arg
>WENV181765434
OGQY01014676
405877
Bacteroidota
GGT
Thr
>WENV181765449
OGQY01015462
405877
Bacteroidota
GGT
Thr
>WENV181765478
OGQY01017255
373714
Bacteroidota
GCC
Gly
>WENV181765481
OGQY01017627
27524
Bacteroidota
GGA
Ser
>WENV181765668
OGQY01033893
169545
Bacteroidota
TGG
Pro
>WENV181765895
OGQY01079160
172085
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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