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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181780145
OGRJ01000003
235097
Bacteroidota
TTT
Lys
>WENV181780374
OGRJ01000518
235097
Bacteroidota
TTT
Lys
>WENV181780410
OGRJ01000683
235097
Bacteroidota
TTT
Lys
>WENV181780378
OGRJ01000552
235102
Bacteroidota
CGT
Thr
>WENV181781080
OGRJ01011196
144657
Bacteroidota
CGG
Pro
>WENV181780533
OGRJ01001232
243025
Bacteroidota
CAT
Met
>WENV181780934
OGRJ01006091
243025
Bacteroidota
CAT
Met
>WENV181780775
OGRJ01003225
338155
Bacteroidota
CTC
Glu
>WENV181781352
OGRJ01046216
343138
Bacteroidota
CCT
Arg
>WENV181780924
OGRJ01005900
58715
Bacteroidota
GAG
Leu
>WENV181780690
OGRJ01002261
46165
Bacteroidota
TGA
Ser
>WENV181780885
OGRJ01005014
17323
Bacteroidota
GGA
Ser
>WENV181781059
OGRJ01010140
338486
Bacteroidota
CAT
Met
>WENV181780941
OGRJ01006243
59689
Bacteroidota
CAG
Leu
>WENV181780434
OGRJ01000778
436206
Bacteroidota
TTG
Gln
>WENV181780227
OGRJ01000102
436206
Bacteroidota
TTG
Gln
>WENV181780688
OGRJ01002261
344692
Bacteroidota
GGT
Thr
>WENV181780150
OGRJ01000008
338124
Bacteroidota
CCG
Arg
>WENV181781020
OGRJ01008553
238121
Bacteroidota
CTT
Lys
>WENV181781019
OGRJ01008553
238121
Bacteroidota
CTT
Lys
>WENV181780740
OGRJ01002757
126641
Bacteroidota
TAC
Val
>WENV181780203
OGRJ01000078
338132
Bacteroidota
GCA
Cys
>WENV181780484
OGRJ01000999
338132
Bacteroidota
GCA
Cys
>WENV181780338
OGRJ01000339
338132
Bacteroidota
GCA
Cys
>WENV181780199
OGRJ01000062
280660
Bacteroidota
CCA
Trp
>WENV181780576
OGRJ01001462
301449
Bacteroidota
CGG
Pro
>WENV181780255
OGRJ01000155
301449
Bacteroidota
CGG
Pro
>WENV181780208
OGRJ01000083
301449
Bacteroidota
CGG
Pro
>WENV181780589
OGRJ01001516
144933
Bacteroidota
TCT
Arg
>WENV181780160
OGRJ01000018
144656
Bacteroidota
GTG
His
>WENV181780456
OGRJ01000857
235207
Bacteroidota
CAT
Met
>WENV181780169
OGRJ01000028
235207
Bacteroidota
CAT
Met
>WENV181781204
OGRJ01018939
144659
Bacteroidota
GTG
His
>WENV181780396
OGRJ01000628
144596
Bacteroidota
GGC
Ala
>WENV181781026
OGRJ01008734
80614
Bacteroidota
>WENV181780964
OGRJ01006819
154643
Bacteroidota
CAT
Met
>WENV181780229
OGRJ01000103
154643
Bacteroidota
CAT
Met
>WENV181780322
OGRJ01000308
144590
Bacteroidota
GTT
Asn
>WENV181780352
OGRJ01000378
95559
Bacteroidota
TAG
Leu
>WENV181780306
OGRJ01000271
144655
Bacteroidota
GGC
Ala
>WENV181781307
OGRJ01034391
338164
Bacteroidota
TTC
Glu
>WENV181781137
OGRJ01013936
95875
Bacteroidota
TAG
Leu
>WENV181780777
OGRJ01003291
139743
Bacteroidota
GGG
Pro
>WENV181780236
OGRJ01000118
139743
Bacteroidota
GGG
Pro
>WENV181780170
OGRJ01000030
139743
Bacteroidota
GGG
Pro
>WENV181780957
OGRJ01006636
147439
Bacteroidota
TCT
Arg
>WENV181781122
OGRJ01013400
411550
Bacteroidota
CTG
Gln
>WENV181781029
OGRJ01008782
338165
Bacteroidota
GGT
Thr
>WENV181781157
OGRJ01015593
132360
Bacteroidota
GGG
Pro
>WENV181780538
OGRJ01001253
425638
Bacteroidota
CTG
Gln
>WENV181780272
OGRJ01000206
425638
Bacteroidota
CTG
Gln
>WENV181780269
OGRJ01000197
425638
Bacteroidota
CTG
Gln
>WENV181780812
OGRJ01003779
353927
Bacteroidota
TTC
Glu
>WENV181780774
OGRJ01003225
23696
Bacteroidota
GCT
Ser
>WENV181781083
OGRJ01011343
414426
Bacteroidota
CTG
Gln
>WENV181781009
OGRJ01008027
55270
Bacteroidota
TGA
Ser
>WENV181780293
OGRJ01000250
55270
Bacteroidota
TGA
Ser
>WENV181780161
OGRJ01000018
16224
Bacteroidota
GGA
Ser
>WENV181780483
OGRJ01000998
151960
Bacteroidota
GGC
Ala
>WENV181780157
OGRJ01000015
338125
Bacteroidota
CCT
Arg
>WENV181780758
OGRJ01003045
235129
Bacteroidota
GCC
Gly
>WENV181780147
OGRJ01000005
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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