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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181781861
OGRK01000821
235097
Bacteroidota
TTT
Lys
>WENV181781870
OGRK01000885
235102
Bacteroidota
CGT
Thr
>WENV181782564
OGRK01029790
267954
Bacteroidota
GCC
Gly
>WENV181781665
OGRK01000234
144657
Bacteroidota
CGG
Pro
>WENV181781813
OGRK01000627
243025
Bacteroidota
CAT
Met
>WENV181782341
OGRK01009257
243025
Bacteroidota
CAT
Met
>WENV181781526
OGRK01000051
338155
Bacteroidota
CTC
Glu
>WENV181782385
OGRK01012306
153993
Bacteroidota
GAT
Ile
>WENV181781502
OGRK01000031
343138
Bacteroidota
CCT
Arg
>WENV181781515
OGRK01000043
58715
Bacteroidota
GAG
Leu
>WENV181782078
OGRK01002690
46165
Bacteroidota
TGA
Ser
>WENV181781748
OGRK01000440
338486
Bacteroidota
CAT
Met
>WENV181781520
OGRK01000047
338486
Bacteroidota
CAT
Met
>WENV181781528
OGRK01000052
136244
Bacteroidota
TAC
Val
>WENV181781514
OGRK01000043
59689
Bacteroidota
CAG
Leu
>WENV181781504
OGRK01000034
436206
Bacteroidota
TTG
Gln
>WENV181781778
OGRK01000542
436206
Bacteroidota
TTG
Gln
>WENV181781601
OGRK01000155
436206
Bacteroidota
TTG
Gln
>WENV181781651
OGRK01000218
20893
Bacteroidota
GGA
Ser
>WENV181782387
OGRK01012475
344692
Bacteroidota
GGT
Thr
>WENV181781536
OGRK01000058
145504
Bacteroidota
TGT
Thr
>WENV181781733
OGRK01000403
338124
Bacteroidota
CCG
Arg
>WENV181781712
OGRK01000341
338124
Bacteroidota
CCG
Arg
>WENV181782077
OGRK01002690
238121
Bacteroidota
CTT
Lys
>WENV181782076
OGRK01002690
238121
Bacteroidota
CTT
Lys
>WENV181782053
OGRK01002335
338132
Bacteroidota
GCA
Cys
>WENV181781496
OGRK01000028
338132
Bacteroidota
GCA
Cys
>WENV181781935
OGRK01001232
45423
Bacteroidota
TGA
Ser
>WENV181781531
OGRK01000054
58714
Bacteroidota
CAA
Leu
>WENV181781753
OGRK01000449
235165
Bacteroidota
CCA
Trp
>WENV181781517
OGRK01000044
301449
Bacteroidota
CGG
Pro
>WENV181781662
OGRK01000232
144933
Bacteroidota
TCT
Arg
>WENV181781563
OGRK01000099
303954
Bacteroidota
GCC
Gly
>WENV181781647
OGRK01000206
144656
Bacteroidota
GTG
His
>WENV181781793
OGRK01000565
235207
Bacteroidota
CAT
Met
>WENV181781766
OGRK01000493
235207
Bacteroidota
CAT
Met
>WENV181781666
OGRK01000234
235180
Bacteroidota
CCA
Trp
>WENV181781729
OGRK01000377
144596
Bacteroidota
GGC
Ala
>WENV181781592
OGRK01000139
144596
Bacteroidota
GGC
Ala
>WENV181781622
OGRK01000170
80607
Bacteroidota
GTA
Tyr
>WENV181781624
OGRK01000172
80614
Bacteroidota
>WENV181782404
OGRK01013865
154643
Bacteroidota
CAT
Met
>WENV181781794
OGRK01000566
154643
Bacteroidota
CAT
Met
>WENV181781637
OGRK01000192
95559
Bacteroidota
TAG
Leu
>WENV181781523
OGRK01000049
144655
Bacteroidota
GGC
Ala
>WENV181781635
OGRK01000188
144639
Bacteroidota
GGC
Ala
>WENV181781501
OGRK01000031
338164
Bacteroidota
TTC
Glu
>WENV181781530
OGRK01000054
95875
Bacteroidota
TAG
Leu
>WENV181781507
OGRK01000037
139743
Bacteroidota
GGG
Pro
>WENV181781505
OGRK01000035
139743
Bacteroidota
GGG
Pro
>WENV181781477
OGRK01000012
240012
Bacteroidota
CCC
Gly
>WENV181781837
OGRK01000719
44852
Bacteroidota
TAA
Leu
>WENV181781500
OGRK01000030
44852
Bacteroidota
TAA
Leu
>WENV181781476
OGRK01000012
147439
Bacteroidota
TCT
Arg
>WENV181782568
OGRK01030418
280513
Bacteroidota
TTT
Lys
>WENV181781979
OGRK01001544
150485
Bacteroidota
GTT
Asn
>WENV181781978
OGRK01001544
150485
Bacteroidota
GTT
Asn
>WENV181781493
OGRK01000023
411550
Bacteroidota
CTG
Gln
>WENV181781594
OGRK01000146
338165
Bacteroidota
GGT
Thr
>WENV181782384
OGRK01012264
132360
Bacteroidota
GGG
Pro
>WENV181781467
OGRK01000005
425638
Bacteroidota
CTG
Gln
>WENV181781724
OGRK01000361
353927
Bacteroidota
TTC
Glu
>WENV181781548
OGRK01000074
353927
Bacteroidota
TTC
Glu
>WENV181781596
OGRK01000149
185921
Bacteroidota
GTC
Asp
>WENV181781984
OGRK01001605
146530
Bacteroidota
TGT
Thr
>WENV181781767
OGRK01000495
23696
Bacteroidota
GCT
Ser
>WENV181781525
OGRK01000051
23696
Bacteroidota
GCT
Ser
>WENV181782196
OGRK01005105
414426
Bacteroidota
CTG
Gln
>WENV181781687
OGRK01000280
414426
Bacteroidota
CTG
Gln
>WENV181781599
OGRK01000152
55270
Bacteroidota
TGA
Ser
>WENV181781593
OGRK01000144
55270
Bacteroidota
TGA
Ser
>WENV181781579
OGRK01000118
55270
Bacteroidota
TGA
Ser
>WENV181781490
OGRK01000019
55270
Bacteroidota
TGA
Ser
>WENV181782002
OGRK01001776
151960
Bacteroidota
GGC
Ala
>WENV181781621
OGRK01000169
16220
Bacteroidota
GGA
Ser
>WENV181781559
OGRK01000097
338125
Bacteroidota
CCT
Arg
>WENV181781534
OGRK01000057
338125
Bacteroidota
CCT
Arg
>WENV181781458
OGRK01000003
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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