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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181823998
OGUK01000007
398836
Bacteroidota
GCA
Cys
>WENV181824003
OGUK01000008
280553
Bacteroidota
TTT
Lys
>WENV181824017
OGUK01000018
285750
Bacteroidota
CCC
Gly
>WENV181824018
OGUK01000018
178907
Bacteroidota
TCT
Arg
>WENV181824023
OGUK01000025
484496
Bacteroidota
TTG
Gln
>WENV181824024
OGUK01000027
480325
Bacteroidota
CTG
Gln
>WENV181824026
OGUK01000030
99847
Bacteroidota
GTA
Tyr
>WENV181824029
OGUK01000032
399200
Bacteroidota
CAT
Met
>WENV181824031
OGUK01000035
175902
Bacteroidota
GGC
Ala
>WENV181824033
OGUK01000037
74084
Bacteroidota
CAG
Leu
>WENV181824035
OGUK01000037
280530
Bacteroidota
CCA
Trp
>WENV181824037
OGUK01000037
20449
Bacteroidota
GGA
Ser
>WENV181824049
OGUK01000047
398871
Bacteroidota
TTC
Glu
>WENV181824050
OGUK01000047
404226
Bacteroidota
CCT
Arg
>WENV181824053
OGUK01000052
280446
Bacteroidota
TTT
Lys
>WENV181824055
OGUK01000057
175903
Bacteroidota
GTG
His
>WENV181824069
OGUK01000070
398829
Bacteroidota
CCT
Arg
>WENV181824079
OGUK01000085
99847
Bacteroidota
GTA
Tyr
>WENV181824080
OGUK01000088
175844
Bacteroidota
GGC
Ala
>WENV181824082
OGUK01000090
56072
Bacteroidota
TAA
Leu
>WENV181824083
OGUK01000094
285360
Bacteroidota
TTT
Lys
>WENV181824085
OGUK01000099
398828
Bacteroidota
CCG
Arg
>WENV181824086
OGUK01000100
280553
Bacteroidota
TTT
Lys
>WENV181824092
OGUK01000116
398836
Bacteroidota
GCA
Cys
>WENV181824104
OGUK01000127
488746
Bacteroidota
CTG
Gln
>WENV181824105
OGUK01000127
20766
Bacteroidota
GGA
Ser
>WENV181824108
OGUK01000129
117741
Bacteroidota
TAG
Leu
>WENV181824112
OGUK01000149
175906
Bacteroidota
GTG
His
>WENV181824115
OGUK01000153
488746
Bacteroidota
CTG
Gln
>WENV181824116
OGUK01000153
20206
Bacteroidota
GGA
Ser
>WENV181824130
OGUK01000184
73011
Bacteroidota
CAA
Leu
>WENV181824153
OGUK01000245
170323
Bacteroidota
GGG
Pro
>WENV181824154
OGUK01000250
295385
Bacteroidota
CCA
Trp
>WENV181824164
OGUK01000282
398836
Bacteroidota
GCA
Cys
>WENV181824167
OGUK01000285
398828
Bacteroidota
CCG
Arg
>WENV181824180
OGUK01000306
57807
Bacteroidota
TGA
Ser
>WENV181824232
OGUK01000472
280451
Bacteroidota
CGT
Thr
>WENV181824236
OGUK01000482
57807
Bacteroidota
TGA
Ser
>WENV181824237
OGUK01000484
280557
Bacteroidota
CAT
Met
>WENV181824247
OGUK01000544
405877
Bacteroidota
GGT
Thr
>WENV181824251
OGUK01000551
351598
Bacteroidota
CGG
Pro
>WENV181824266
OGUK01000628
404226
Bacteroidota
CCT
Arg
>WENV181824280
OGUK01000682
99847
Bacteroidota
GTA
Tyr
>WENV181824290
OGUK01000726
57807
Bacteroidota
TGA
Ser
>WENV181824300
OGUK01000841
399200
Bacteroidota
CAT
Met
>WENV181824336
OGUK01001095
405877
Bacteroidota
GGT
Thr
>WENV181824350
OGUK01001231
118089
Bacteroidota
TAG
Leu
>WENV181824355
OGUK01001265
186874
Bacteroidota
CAT
Met
>WENV181824359
OGUK01001311
418894
Bacteroidota
TTC
Glu
>WENV181824411
OGUK01001803
176192
Bacteroidota
TCT
Arg
>WENV181824416
OGUK01001829
398836
Bacteroidota
GCA
Cys
>WENV181824418
OGUK01001831
280478
Bacteroidota
GCC
Gly
>WENV181824439
OGUK01002176
351598
Bacteroidota
CGG
Pro
>WENV181824444
OGUK01002256
56493
Bacteroidota
TGA
Ser
>WENV181824447
OGUK01002306
484496
Bacteroidota
TTG
Gln
>WENV181824541
OGUK01003565
183889
Bacteroidota
GGC
Ala
>WENV181824569
OGUK01003890
351598
Bacteroidota
CGG
Pro
>WENV181824653
OGUK01006130
186142
Bacteroidota
GAT
Ile
>WENV181824659
OGUK01006173
483416
Bacteroidota
CTG
Gln
>WENV181824716
OGUK01007606
289031
Bacteroidota
CAT
Met
>WENV181824762
OGUK01009376
186108
Bacteroidota
GTT
Asn
>WENV181824805
OGUK01011374
291612
Bacteroidota
>WENV181824939
OGUK01023699
400088
Bacteroidota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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