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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181859030
OGWQ01000009
365112
Bacteroidota
TTT
Lys
>WENV181859033
OGWQ01000011
285750
Bacteroidota
CCC
Gly
>WENV181859047
OGWQ01000025
399200
Bacteroidota
CAT
Met
>WENV181859048
OGWQ01000028
399200
Bacteroidota
CAT
Met
>WENV181859050
OGWQ01000029
398871
Bacteroidota
TTC
Glu
>WENV181859051
OGWQ01000029
404226
Bacteroidota
CCT
Arg
>WENV181859072
OGWQ01000055
203954
Bacteroidota
GTC
Asp
>WENV181859078
OGWQ01000070
73011
Bacteroidota
CAA
Leu
>WENV181859100
OGWQ01000112
280532
Bacteroidota
>WENV181859110
OGWQ01000122
175906
Bacteroidota
GTG
His
>WENV181859117
OGWQ01000139
175904
Bacteroidota
CGG
Pro
>WENV181859118
OGWQ01000139
280530
Bacteroidota
CCA
Trp
>WENV181859121
OGWQ01000151
280557
Bacteroidota
CAT
Met
>WENV181859122
OGWQ01000154
398829
Bacteroidota
CCT
Arg
>WENV181859138
OGWQ01000185
480404
Bacteroidota
TTG
Gln
>WENV181859140
OGWQ01000190
182267
Bacteroidota
GTT
Asn
>WENV181859145
OGWQ01000209
229246
Bacteroidota
GGC
Ala
>WENV181859148
OGWQ01000217
351598
Bacteroidota
CGG
Pro
>WENV181859149
OGWQ01000221
280478
Bacteroidota
GCC
Gly
>WENV181859155
OGWQ01000233
74084
Bacteroidota
CAG
Leu
>WENV181859158
OGWQ01000249
480325
Bacteroidota
CTG
Gln
>WENV181859162
OGWQ01000255
56493
Bacteroidota
TGA
Ser
>WENV181859167
OGWQ01000267
365112
Bacteroidota
TTT
Lys
>WENV181859168
OGWQ01000269
117804
Bacteroidota
TAG
Leu
>WENV181859179
OGWQ01000309
56072
Bacteroidota
TAA
Leu
>WENV181859182
OGWQ01000314
169545
Bacteroidota
TGG
Pro
>WENV181859184
OGWQ01000318
176192
Bacteroidota
TCT
Arg
>WENV181859195
OGWQ01000346
365112
Bacteroidota
TTT
Lys
>WENV181859203
OGWQ01000363
289031
Bacteroidota
CAT
Met
>WENV181859212
OGWQ01000399
480318
Bacteroidota
CTG
Gln
>WENV181859232
OGWQ01000458
399026
Bacteroidota
CCT
Arg
>WENV181859250
OGWQ01000545
172207
Bacteroidota
GGG
Pro
>WENV181859261
OGWQ01000578
175903
Bacteroidota
GTG
His
>WENV181859264
OGWQ01000587
175936
Bacteroidota
CAT
Met
>WENV181859266
OGWQ01000589
351598
Bacteroidota
CGG
Pro
>WENV181859267
OGWQ01000593
20492
Bacteroidota
GGA
Ser
>WENV181859276
OGWQ01000619
483416
Bacteroidota
CTG
Gln
>WENV181859278
OGWQ01000643
365112
Bacteroidota
TTT
Lys
>WENV181859282
OGWQ01000650
280446
Bacteroidota
TTT
Lys
>WENV181859283
OGWQ01000654
172207
Bacteroidota
GGG
Pro
>WENV181859289
OGWQ01000709
172207
Bacteroidota
GGG
Pro
>WENV181859292
OGWQ01000718
20449
Bacteroidota
GGA
Ser
>WENV181859293
OGWQ01000719
322836
Bacteroidota
CGT
Thr
>WENV181859296
OGWQ01000738
280446
Bacteroidota
TTT
Lys
>WENV181859320
OGWQ01000829
118089
Bacteroidota
TAG
Leu
>WENV181859346
OGWQ01000966
172207
Bacteroidota
GGG
Pro
>WENV181859374
OGWQ01001087
398828
Bacteroidota
CCG
Arg
>WENV181859386
OGWQ01001159
484496
Bacteroidota
TTG
Gln
>WENV181859398
OGWQ01001260
201819
Bacteroidota
CAT
Met
>WENV181859402
OGWQ01001314
99847
Bacteroidota
GTA
Tyr
>WENV181859421
OGWQ01001456
99847
Bacteroidota
GTA
Tyr
>WENV181859432
OGWQ01001554
175902
Bacteroidota
GGC
Ala
>WENV181859438
OGWQ01001582
69204
Bacteroidota
TGA
Ser
>WENV181859443
OGWQ01001589
398836
Bacteroidota
GCA
Cys
>WENV181859452
OGWQ01001721
175844
Bacteroidota
GGC
Ala
>WENV181859457
OGWQ01001760
172207
Bacteroidota
GGG
Pro
>WENV181859460
OGWQ01001795
20206
Bacteroidota
GGA
Ser
>WENV181859480
OGWQ01001963
280451
Bacteroidota
CGT
Thr
>WENV181859482
OGWQ01001981
156068
Bacteroidota
TAC
Val
>WENV181859489
OGWQ01002030
178907
Bacteroidota
TCT
Arg
>WENV181859496
OGWQ01002131
69204
Bacteroidota
TGA
Ser
>WENV181859510
OGWQ01002295
289031
Bacteroidota
CAT
Met
>WENV181859532
OGWQ01002542
351598
Bacteroidota
CGG
Pro
>WENV181859560
OGWQ01002863
488746
Bacteroidota
CTG
Gln
>WENV181859582
OGWQ01003340
175838
Bacteroidota
GTT
Asn
>WENV181859583
OGWQ01003340
175838
Bacteroidota
GTT
Asn
>WENV181859603
OGWQ01003924
484496
Bacteroidota
TTG
Gln
>WENV181859620
OGWQ01004256
21127
Bacteroidota
GGA
Ser
>WENV181859625
OGWQ01004299
170323
Bacteroidota
GGG
Pro
>WENV181859643
OGWQ01004700
398836
Bacteroidota
GCA
Cys
>WENV181859659
OGWQ01005054
159415
Bacteroidota
TAC
Val
>WENV181859688
OGWQ01005886
483416
Bacteroidota
CTG
Gln
>WENV181859697
OGWQ01006038
187400
Bacteroidota
GTT
Asn
>WENV181859735
OGWQ01007307
280446
Bacteroidota
TTT
Lys
>WENV181859762
OGWQ01008471
178133
Bacteroidota
GAT
Ile
>WENV181859773
OGWQ01008792
186874
Bacteroidota
CAT
Met
>WENV181859792
OGWQ01009478
175903
Bacteroidota
GTG
His
>WENV181859817
OGWQ01011356
405877
Bacteroidota
GGT
Thr
>WENV181859838
OGWQ01013073
484496
Bacteroidota
TTG
Gln
>WENV181859864
OGWQ01015340
285360
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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