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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181930096
OGYP01000417
332896
Bacteroidota
TTT
Lys
>WENV181930098
OGYP01000431
183889
Bacteroidota
GGC
Ala
>WENV181930148
OGYP01000766
483416
Bacteroidota
CTG
Gln
>WENV181930157
OGYP01000825
175902
Bacteroidota
GGC
Ala
>WENV181930255
OGYP01001443
398829
Bacteroidota
CCT
Arg
>WENV181930302
OGYP01001934
280557
Bacteroidota
CAT
Met
>WENV181930311
OGYP01001984
20206
Bacteroidota
GGA
Ser
>WENV181930351
OGYP01002564
398828
Bacteroidota
CCG
Arg
>WENV181930445
OGYP01004198
57807
Bacteroidota
TGA
Ser
>WENV181930517
OGYP01005867
289031
Bacteroidota
CAT
Met
>WENV181930570
OGYP01007283
57807
Bacteroidota
TGA
Ser
>WENV181930672
OGYP01012140
175844
Bacteroidota
GGC
Ala
>WENV181930681
OGYP01012506
280446
Bacteroidota
TTT
Lys
>WENV181930704
OGYP01013851
175903
Bacteroidota
GTG
His
>WENV181930707
OGYP01014180
488746
Bacteroidota
CTG
Gln
>WENV181930722
OGYP01016033
182267
Bacteroidota
GTT
Asn
>WENV181930723
OGYP01016033
182267
Bacteroidota
GTT
Asn
>WENV181930738
OGYP01016984
280451
Bacteroidota
CGT
Thr
>WENV181930771
OGYP01020505
20492
Bacteroidota
GGA
Ser
>WENV181930773
OGYP01020593
399200
Bacteroidota
CAT
Met
>WENV181930808
OGYP01024422
20449
Bacteroidota
GGA
Ser
>WENV181930836
OGYP01027889
285750
Bacteroidota
CCC
Gly
>WENV181930839
OGYP01028353
398836
Bacteroidota
GCA
Cys
>WENV181930902
OGYP01040108
175904
Bacteroidota
CGG
Pro
>WENV181930919
OGYP01043805
56493
Bacteroidota
TGA
Ser
>WENV181930930
OGYP01047799
203954
Bacteroidota
GTC
Asp
>WENV181931018
OGYP01068572
484496
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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