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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
118 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181958531
OGZM01000099
235097
Bacteroidota
TTT
Lys
>WENV181958539
OGZM01000102
235097
Bacteroidota
TTT
Lys
>WENV181958940
OGZM01000886
235097
Bacteroidota
TTT
Lys
>WENV181958954
OGZM01000936
235097
Bacteroidota
TTT
Lys
>WENV181958593
OGZM01000163
235102
Bacteroidota
CGT
Thr
>WENV181958554
OGZM01000125
144657
Bacteroidota
CGG
Pro
>WENV181958622
OGZM01000202
144657
Bacteroidota
CGG
Pro
>WENV181958956
OGZM01000939
338155
Bacteroidota
CTC
Glu
>WENV181959173
OGZM01002428
338155
Bacteroidota
CTC
Glu
>WENV181958483
OGZM01000065
343138
Bacteroidota
CCT
Arg
>WENV181958856
OGZM01000658
343138
Bacteroidota
CCT
Arg
>WENV181958366
OGZM01000013
58715
Bacteroidota
GAG
Leu
>WENV181958494
OGZM01000073
95618
Bacteroidota
TAG
Leu
>WENV181959391
OGZM01007360
24174
Bacteroidota
GCT
Ser
>WENV181958714
OGZM01000351
338486
Bacteroidota
CAT
Met
>WENV181958713
OGZM01000351
338486
Bacteroidota
CAT
Met
>WENV181958571
OGZM01000146
338486
Bacteroidota
CAT
Met
>WENV181958397
OGZM01000021
338486
Bacteroidota
CAT
Met
>WENV181958785
OGZM01000503
48053
Bacteroidota
TGA
Ser
>WENV181958717
OGZM01000356
415410
Bacteroidota
TTG
Gln
>WENV181958526
OGZM01000094
415410
Bacteroidota
TTG
Gln
>WENV181959247
OGZM01003496
415410
Bacteroidota
TTG
Gln
>WENV181959054
OGZM01001433
415410
Bacteroidota
TTG
Gln
>WENV181958499
OGZM01000080
411543
Bacteroidota
CTG
Gln
>WENV181958595
OGZM01000165
59689
Bacteroidota
CAG
Leu
>WENV181958365
OGZM01000013
59689
Bacteroidota
CAG
Leu
>WENV181958458
OGZM01000048
145504
Bacteroidota
TGT
Thr
>WENV181958606
OGZM01000183
235182
Bacteroidota
>WENV181959346
OGZM01005838
341950
Bacteroidota
>WENV181959018
OGZM01001193
272983
Bacteroidota
CGT
Thr
>WENV181958694
OGZM01000306
338124
Bacteroidota
CCG
Arg
>WENV181958663
OGZM01000275
235203
Bacteroidota
TTT
Lys
>WENV181958537
OGZM01000101
238121
Bacteroidota
CTT
Lys
>WENV181958536
OGZM01000101
238121
Bacteroidota
CTT
Lys
>WENV181959055
OGZM01001447
338132
Bacteroidota
GCA
Cys
>WENV181958696
OGZM01000314
338132
Bacteroidota
GCA
Cys
>WENV181958640
OGZM01000229
338132
Bacteroidota
GCA
Cys
>WENV181958373
OGZM01000015
338132
Bacteroidota
GCA
Cys
>WENV181958650
OGZM01000252
144688
Bacteroidota
CAT
Met
>WENV181958538
OGZM01000101
45423
Bacteroidota
TGA
Ser
>WENV181958535
OGZM01000101
45423
Bacteroidota
TGA
Ser
>WENV181958741
OGZM01000412
193809
Bacteroidota
CAT
Met
>WENV181959477
OGZM01016621
46489
Bacteroidota
TGA
Ser
>WENV181959476
OGZM01016302
37076
Bacteroidota
TAA
Leu
>WENV181958370
OGZM01000014
181746
Bacteroidota
GGC
Ala
>WENV181958560
OGZM01000135
58714
Bacteroidota
CAA
Leu
>WENV181958506
OGZM01000082
235165
Bacteroidota
CCA
Trp
>WENV181959024
OGZM01001204
280660
Bacteroidota
CCA
Trp
>WENV181958851
OGZM01000647
144933
Bacteroidota
TCT
Arg
>WENV181958758
OGZM01000431
144933
Bacteroidota
TCT
Arg
>WENV181958523
OGZM01000091
144933
Bacteroidota
TCT
Arg
>WENV181958453
OGZM01000045
144933
Bacteroidota
TCT
Arg
>WENV181959519
OGZM01029084
251266
Bacteroidota
CTT
Lys
>WENV181959350
OGZM01006005
339634
Bacteroidota
CCT
Arg
>WENV181958642
OGZM01000233
144656
Bacteroidota
GTG
His
>WENV181958914
OGZM01000817
235207
Bacteroidota
CAT
Met
>WENV181958760
OGZM01000434
235207
Bacteroidota
CAT
Met
>WENV181958377
OGZM01000017
144659
Bacteroidota
GTG
His
>WENV181958376
OGZM01000017
144659
Bacteroidota
GTG
His
>WENV181958623
OGZM01000202
235180
Bacteroidota
CCA
Trp
>WENV181958697
OGZM01000323
144596
Bacteroidota
GGC
Ala
>WENV181958461
OGZM01000049
80607
Bacteroidota
GTA
Tyr
>WENV181958421
OGZM01000036
80607
Bacteroidota
GTA
Tyr
>WENV181958469
OGZM01000054
113604
Bacteroidota
>WENV181958466
OGZM01000054
113604
Bacteroidota
>WENV181958378
OGZM01000017
80614
Bacteroidota
>WENV181958368
OGZM01000013
80614
Bacteroidota
>WENV181959090
OGZM01001634
52358
Bacteroidota
TGA
Ser
>WENV181958878
OGZM01000739
52358
Bacteroidota
TGA
Ser
>WENV181958787
OGZM01000503
52358
Bacteroidota
TGA
Ser
>WENV181958764
OGZM01000455
52358
Bacteroidota
TGA
Ser
>WENV181958662
OGZM01000272
52358
Bacteroidota
TGA
Ser
>WENV181958372
OGZM01000015
52358
Bacteroidota
TGA
Ser
>WENV181958371
OGZM01000015
52358
Bacteroidota
TGA
Ser
>WENV181959331
OGZM01005090
154643
Bacteroidota
CAT
Met
>WENV181959528
OGZM01031345
415558
Bacteroidota
TTG
Gln
>WENV181959032
OGZM01001254
95559
Bacteroidota
TAG
Leu
>WENV181958777
OGZM01000480
419272
Bacteroidota
CTG
Gln
>WENV181958724
OGZM01000371
144655
Bacteroidota
GGC
Ala
>WENV181958550
OGZM01000118
144639
Bacteroidota
GGC
Ala
>WENV181958482
OGZM01000065
338164
Bacteroidota
TTC
Glu
>WENV181958481
OGZM01000065
338164
Bacteroidota
TTC
Glu
>WENV181959075
OGZM01001521
95875
Bacteroidota
TAG
Leu
>WENV181958561
OGZM01000135
95875
Bacteroidota
TAG
Leu
>WENV181958772
OGZM01000473
338314
Bacteroidota
CCT
Arg
>WENV181958702
OGZM01000329
240012
Bacteroidota
CCC
Gly
>WENV181958594
OGZM01000164
240012
Bacteroidota
CCC
Gly
>WENV181959013
OGZM01001180
44852
Bacteroidota
TAA
Leu
>WENV181958616
OGZM01000191
147439
Bacteroidota
TCT
Arg
>WENV181958358
OGZM01000009
150485
Bacteroidota
GTT
Asn
>WENV181958357
OGZM01000009
150485
Bacteroidota
GTT
Asn
>WENV181958946
OGZM01000914
132360
Bacteroidota
GGG
Pro
>WENV181958778
OGZM01000482
132360
Bacteroidota
GGG
Pro
>WENV181958530
OGZM01000099
132360
Bacteroidota
GGG
Pro
>WENV181958498
OGZM01000080
132360
Bacteroidota
GGG
Pro
>WENV181959389
OGZM01007336
425638
Bacteroidota
CTG
Gln
>WENV181958375
OGZM01000016
19317
Bacteroidota
GGA
Ser
>WENV181959378
OGZM01006949
353927
Bacteroidota
TTC
Glu
>WENV181958448
OGZM01000041
353927
Bacteroidota
TTC
Glu
>WENV181958447
OGZM01000041
353927
Bacteroidota
TTC
Glu
>WENV181958770
OGZM01000466
185921
Bacteroidota
GTC
Asp
>WENV181958769
OGZM01000466
185921
Bacteroidota
GTC
Asp
>WENV181958893
OGZM01000785
23696
Bacteroidota
GCT
Ser
>WENV181959302
OGZM01004313
414426
Bacteroidota
CTG
Gln
>WENV181959444
OGZM01012699
151960
Bacteroidota
GGC
Ala
>WENV181958863
OGZM01000691
16220
Bacteroidota
GGA
Ser
>WENV181959469
OGZM01015550
127023
Bacteroidota
GGG
Pro
>WENV181959106
OGZM01001773
338125
Bacteroidota
CCT
Arg
>WENV181959078
OGZM01001557
338125
Bacteroidota
CCT
Arg
>WENV181958965
OGZM01000997
338125
Bacteroidota
CCT
Arg
>WENV181958359
OGZM01000010
338125
Bacteroidota
CCT
Arg
>WENV181958364
OGZM01000013
235129
Bacteroidota
GCC
Gly
>WENV181958589
OGZM01000160
235129
Bacteroidota
GCC
Gly
>WENV181958587
OGZM01000160
235129
Bacteroidota
GCC
Gly
>WENV181958519
OGZM01000090
235129
Bacteroidota
GCC
Gly
>WENV181958517
OGZM01000090
235129
Bacteroidota
GCC
Gly
>WENV181959112
OGZM01001834
411629
Bacteroidota
TTG
Gln
>WENV181958915
OGZM01000823
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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