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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181962417
OGZP01000045
398836
Bacteroidota
GCA
Cys
>WENV181962442
OGZP01000066
398828
Bacteroidota
CCG
Arg
>WENV181962446
OGZP01000075
57807
Bacteroidota
TGA
Ser
>WENV181962447
OGZP01000076
484496
Bacteroidota
TTG
Gln
>WENV181962449
OGZP01000084
99847
Bacteroidota
GTA
Tyr
>WENV181962469
OGZP01000117
186874
Bacteroidota
CAT
Met
>WENV181962532
OGZP01000199
285360
Bacteroidota
TTT
Lys
>WENV181962542
OGZP01000227
280451
Bacteroidota
CGT
Thr
>WENV181962546
OGZP01000236
280446
Bacteroidota
TTT
Lys
>WENV181962587
OGZP01000346
158068
Bacteroidota
GGG
Pro
>WENV181962588
OGZP01000346
488746
Bacteroidota
CTG
Gln
>WENV181962595
OGZP01000366
176192
Bacteroidota
TCT
Arg
>WENV181962598
OGZP01000371
351598
Bacteroidota
CGG
Pro
>WENV181962603
OGZP01000386
332896
Bacteroidota
TTT
Lys
>WENV181962608
OGZP01000398
480404
Bacteroidota
TTG
Gln
>WENV181962610
OGZP01000403
57807
Bacteroidota
TGA
Ser
>WENV181962613
OGZP01000407
280451
Bacteroidota
CGT
Thr
>WENV181962623
OGZP01000440
280557
Bacteroidota
CAT
Met
>WENV181962637
OGZP01000503
280557
Bacteroidota
CAT
Met
>WENV181962678
OGZP01000647
483416
Bacteroidota
CTG
Gln
>WENV181962679
OGZP01000652
20766
Bacteroidota
GGA
Ser
>WENV181962680
OGZP01000654
280446
Bacteroidota
TTT
Lys
>WENV181962696
OGZP01000695
398836
Bacteroidota
GCA
Cys
>WENV181962716
OGZP01000798
20206
Bacteroidota
GGA
Ser
>WENV181962773
OGZP01001042
398828
Bacteroidota
CCG
Arg
>WENV181962780
OGZP01001085
351598
Bacteroidota
CGG
Pro
>WENV181962814
OGZP01001353
117741
Bacteroidota
TAG
Leu
>WENV181962815
OGZP01001370
398836
Bacteroidota
GCA
Cys
>WENV181962860
OGZP01001659
175902
Bacteroidota
GGC
Ala
>WENV181962868
OGZP01001724
175903
Bacteroidota
GTG
His
>WENV181962870
OGZP01001749
29791
Bacteroidota
GCT
Ser
>WENV181962871
OGZP01001749
398860
Bacteroidota
CTC
Glu
>WENV181962882
OGZP01001812
289031
Bacteroidota
CAT
Met
>WENV181962888
OGZP01001850
280446
Bacteroidota
TTT
Lys
>WENV181962901
OGZP01002003
159415
Bacteroidota
TAC
Val
>WENV181962904
OGZP01002026
175844
Bacteroidota
GGC
Ala
>WENV181962937
OGZP01002196
99847
Bacteroidota
GTA
Tyr
>WENV181962972
OGZP01002621
57807
Bacteroidota
TGA
Ser
>WENV181963013
OGZP01003142
56072
Bacteroidota
TAA
Leu
>WENV181963018
OGZP01003222
56072
Bacteroidota
TAA
Leu
>WENV181963054
OGZP01003724
332896
Bacteroidota
TTT
Lys
>WENV181963099
OGZP01004563
56493
Bacteroidota
TGA
Ser
>WENV181963104
OGZP01004627
99847
Bacteroidota
GTA
Tyr
>WENV181963127
OGZP01005088
56493
Bacteroidota
TGA
Ser
>WENV181963147
OGZP01005614
182267
Bacteroidota
GTT
Asn
>WENV181963176
OGZP01006460
56072
Bacteroidota
TAA
Leu
>WENV181963197
OGZP01007828
398836
Bacteroidota
GCA
Cys
>WENV181963198
OGZP01007828
398836
Bacteroidota
GCA
Cys
>WENV181963244
OGZP01009371
20449
Bacteroidota
GGA
Ser
>WENV181963247
OGZP01009558
175904
Bacteroidota
CGG
Pro
>WENV181963248
OGZP01009558
280530
Bacteroidota
CCA
Trp
>WENV181963255
OGZP01010047
398829
Bacteroidota
CCT
Arg
>WENV181963263
OGZP01010467
399200
Bacteroidota
CAT
Met
>WENV181963278
OGZP01011577
398871
Bacteroidota
TTC
Glu
>WENV181963308
OGZP01013268
280478
Bacteroidota
GCC
Gly
>WENV181963313
OGZP01013524
480325
Bacteroidota
CTG
Gln
>WENV181963359
OGZP01017939
178907
Bacteroidota
TCT
Arg
>WENV181963360
OGZP01017945
182267
Bacteroidota
GTT
Asn
>WENV181963361
OGZP01017965
74084
Bacteroidota
CAG
Leu
>WENV181963401
OGZP01024670
285750
Bacteroidota
CCC
Gly
>WENV181963434
OGZP01029049
175906
Bacteroidota
GTG
His
>WENV181963441
OGZP01030244
404226
Bacteroidota
CCT
Arg
>WENV181963519
OGZP01054502
118089
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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