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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181987237
OHAM01035218
291612
Bacteroidota
>WENV181986497
OHAM01000433
280532
Bacteroidota
>WENV181986938
OHAM01008948
73011
Bacteroidota
CAA
Leu
>WENV181986758
OHAM01003490
74084
Bacteroidota
CAG
Leu
>WENV181986802
OHAM01004268
74084
Bacteroidota
CAG
Leu
>WENV181986807
OHAM01004437
280557
Bacteroidota
CAT
Met
>WENV181986793
OHAM01004244
201819
Bacteroidota
CAT
Met
>WENV181986873
OHAM01006349
175936
Bacteroidota
CAT
Met
>WENV181986853
OHAM01005907
399200
Bacteroidota
CAT
Met
>WENV181987063
OHAM01014716
399200
Bacteroidota
CAT
Met
>WENV181986563
OHAM01000846
295385
Bacteroidota
CCA
Trp
>WENV181986705
OHAM01002455
280530
Bacteroidota
CCA
Trp
>WENV181986862
OHAM01006163
285750
Bacteroidota
CCC
Gly
>WENV181986956
OHAM01009654
398828
Bacteroidota
CCG
Arg
>WENV181986819
OHAM01004780
404226
Bacteroidota
CCT
Arg
>WENV181986748
OHAM01003377
399026
Bacteroidota
CCT
Arg
>WENV181986704
OHAM01002455
175904
Bacteroidota
CGG
Pro
>WENV181986608
OHAM01001131
351598
Bacteroidota
CGG
Pro
>WENV181986752
OHAM01003413
351598
Bacteroidota
CGG
Pro
>WENV181986767
OHAM01003619
351598
Bacteroidota
CGG
Pro
>WENV181987118
OHAM01019748
351598
Bacteroidota
CGG
Pro
>WENV181987027
OHAM01012979
280451
Bacteroidota
CGT
Thr
>WENV181986658
OHAM01001617
322836
Bacteroidota
CGT
Thr
>WENV181986654
OHAM01001573
398860
Bacteroidota
CTC
Glu
>WENV181986815
OHAM01004696
488746
Bacteroidota
CTG
Gln
>WENV181986451
OHAM01000226
480318
Bacteroidota
CTG
Gln
>WENV181986548
OHAM01000727
480318
Bacteroidota
CTG
Gln
>WENV181986776
OHAM01003834
480325
Bacteroidota
CTG
Gln
>WENV181987132
OHAM01021275
480325
Bacteroidota
CTG
Gln
>WENV181986544
OHAM01000716
398836
Bacteroidota
GCA
Cys
>WENV181986701
OHAM01002392
398836
Bacteroidota
GCA
Cys
>WENV181986816
OHAM01004773
398836
Bacteroidota
GCA
Cys
>WENV181986986
OHAM01010642
398836
Bacteroidota
GCA
Cys
>WENV181986757
OHAM01003490
280478
Bacteroidota
GCC
Gly
>WENV181986899
OHAM01007326
20206
Bacteroidota
GGA
Ser
>WENV181987028
OHAM01012999
175902
Bacteroidota
GGC
Ala
>WENV181987128
OHAM01020397
175844
Bacteroidota
GGC
Ala
>WENV181986601
OHAM01001082
229246
Bacteroidota
GGC
Ala
>WENV181986620
OHAM01001209
170323
Bacteroidota
GGG
Pro
>WENV181986858
OHAM01006010
170323
Bacteroidota
GGG
Pro
>WENV181986882
OHAM01006587
170323
Bacteroidota
GGG
Pro
>WENV181987026
OHAM01012911
170323
Bacteroidota
GGG
Pro
>WENV181987113
OHAM01019349
170323
Bacteroidota
GGG
Pro
>WENV181986697
OHAM01002299
400088
Bacteroidota
GGT
Thr
>WENV181986788
OHAM01004173
175906
Bacteroidota
GTG
His
>WENV181986789
OHAM01004173
175906
Bacteroidota
GTG
His
>WENV181986702
OHAM01002423
175903
Bacteroidota
GTG
His
>WENV181987122
OHAM01019971
175838
Bacteroidota
GTT
Asn
>WENV181987123
OHAM01019971
175838
Bacteroidota
GTT
Asn
>WENV181986730
OHAM01002990
56072
Bacteroidota
TAA
Leu
>WENV181987120
OHAM01019891
117741
Bacteroidota
TAG
Leu
>WENV181986713
OHAM01002665
118089
Bacteroidota
TAG
Leu
>WENV181986549
OHAM01000737
117804
Bacteroidota
TAG
Leu
>WENV181986411
OHAM01000130
176192
Bacteroidota
TCT
Arg
>WENV181986875
OHAM01006423
176192
Bacteroidota
TCT
Arg
>WENV181986505
OHAM01000449
69204
Bacteroidota
TGA
Ser
>WENV181986580
OHAM01000967
69204
Bacteroidota
TGA
Ser
>WENV181986703
OHAM01002445
69204
Bacteroidota
TGA
Ser
>WENV181986719
OHAM01002843
69204
Bacteroidota
TGA
Ser
>WENV181986977
OHAM01010293
69204
Bacteroidota
TGA
Ser
>WENV181986990
OHAM01010848
69204
Bacteroidota
TGA
Ser
>WENV181986820
OHAM01004780
398871
Bacteroidota
TTC
Glu
>WENV181986821
OHAM01004780
398871
Bacteroidota
TTC
Glu
>WENV181986491
OHAM01000404
480404
Bacteroidota
TTG
Gln
>WENV181986603
OHAM01001090
480404
Bacteroidota
TTG
Gln
>WENV181986846
OHAM01005542
480404
Bacteroidota
TTG
Gln
>WENV181986717
OHAM01002820
484496
Bacteroidota
TTG
Gln
>WENV181987012
OHAM01012113
484496
Bacteroidota
TTG
Gln
>WENV181987011
OHAM01012105
285360
Bacteroidota
TTT
Lys
>WENV181986535
OHAM01000628
280553
Bacteroidota
TTT
Lys
>WENV181986522
OHAM01000525
280446
Bacteroidota
TTT
Lys
>WENV181986641
OHAM01001391
280446
Bacteroidota
TTT
Lys
>WENV181986889
OHAM01006859
280446
Bacteroidota
TTT
Lys
>WENV181986543
OHAM01000713
365112
Bacteroidota
TTT
Lys
>WENV181986673
OHAM01001858
365112
Bacteroidota
TTT
Lys
>WENV181986745
OHAM01003308
365112
Bacteroidota
TTT
Lys
>WENV181986753
OHAM01003445
365112
Bacteroidota
TTT
Lys
>WENV181986912
OHAM01007900
365112
Bacteroidota
TTT
Lys
>WENV181986914
OHAM01007949
365112
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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