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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182006362
OHBF01000666
295385
Bacteroidota
CCA
Trp
>WENV182006416
OHBF01001286
285360
Bacteroidota
TTT
Lys
>WENV182006439
OHBF01001628
285360
Bacteroidota
TTT
Lys
>WENV182006145
OHBF01000003
117741
Bacteroidota
TAG
Leu
>WENV182006173
OHBF01000036
398829
Bacteroidota
CCT
Arg
>WENV182006588
OHBF01012405
398829
Bacteroidota
CCT
Arg
>WENV182006238
OHBF01000153
404226
Bacteroidota
CCT
Arg
>WENV182006552
OHBF01007454
175904
Bacteroidota
CGG
Pro
>WENV182006417
OHBF01001317
289031
Bacteroidota
CAT
Met
>WENV182006396
OHBF01001084
280553
Bacteroidota
TTT
Lys
>WENV182006479
OHBF01002892
280553
Bacteroidota
TTT
Lys
>WENV182006240
OHBF01000155
280557
Bacteroidota
CAT
Met
>WENV182006304
OHBF01000338
20206
Bacteroidota
GGA
Ser
>WENV182006415
OHBF01001263
483416
Bacteroidota
CTG
Gln
>WENV182006239
OHBF01000153
398871
Bacteroidota
TTC
Glu
>WENV182006324
OHBF01000425
175906
Bacteroidota
GTG
His
>WENV182006218
OHBF01000118
175903
Bacteroidota
GTG
His
>WENV182006473
OHBF01002574
118089
Bacteroidota
TAG
Leu
>WENV182006526
OHBF01004937
398872
Bacteroidota
GGT
Thr
>WENV182006288
OHBF01000274
156406
Bacteroidota
TAC
Val
>WENV182006373
OHBF01000744
156406
Bacteroidota
TAC
Val
>WENV182006572
OHBF01010678
175936
Bacteroidota
CAT
Met
>WENV182006267
OHBF01000201
178907
Bacteroidota
TCT
Arg
>WENV182006281
OHBF01000260
20449
Bacteroidota
GGA
Ser
>WENV182006551
OHBF01007342
21127
Bacteroidota
GGA
Ser
>WENV182006246
OHBF01000166
57807
Bacteroidota
TGA
Ser
>WENV182006366
OHBF01000689
57807
Bacteroidota
TGA
Ser
>WENV182006149
OHBF01000009
175902
Bacteroidota
GGC
Ala
>WENV182006153
OHBF01000014
480404
Bacteroidota
TTG
Gln
>WENV182006170
OHBF01000032
280451
Bacteroidota
CGT
Thr
>WENV182006264
OHBF01000192
99847
Bacteroidota
GTA
Tyr
>WENV182006278
OHBF01000251
399200
Bacteroidota
CAT
Met
>WENV182006448
OHBF01001943
399200
Bacteroidota
CAT
Met
>WENV182006367
OHBF01000690
186874
Bacteroidota
CAT
Met
>WENV182006299
OHBF01000322
280478
Bacteroidota
GCC
Gly
>WENV182006392
OHBF01000953
175844
Bacteroidota
GGC
Ala
>WENV182006675
OHBF01029858
280532
Bacteroidota
>WENV182006277
OHBF01000250
73011
Bacteroidota
CAA
Leu
>WENV182006176
OHBF01000042
398828
Bacteroidota
CCG
Arg
>WENV182006518
OHBF01004364
74084
Bacteroidota
CAG
Leu
>WENV182006405
OHBF01001194
480325
Bacteroidota
CTG
Gln
>WENV182006330
OHBF01000448
176192
Bacteroidota
TCT
Arg
>WENV182006438
OHBF01001616
285750
Bacteroidota
CCC
Gly
>WENV182006580
OHBF01011898
117804
Bacteroidota
TAG
Leu
>WENV182006231
OHBF01000137
398836
Bacteroidota
GCA
Cys
>WENV182006361
OHBF01000645
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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