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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182027195
OHCN01000001
172207
Bacteroidota
GGG
Pro
>WENV182027234
OHCN01000020
172207
Bacteroidota
GGG
Pro
>WENV182027294
OHCN01000087
117741
Bacteroidota
TAG
Leu
>WENV182027258
OHCN01000038
398829
Bacteroidota
CCT
Arg
>WENV182027300
OHCN01000090
398829
Bacteroidota
CCT
Arg
>WENV182027278
OHCN01000063
280557
Bacteroidota
CAT
Met
>WENV182027198
OHCN01000001
20206
Bacteroidota
GGA
Ser
>WENV182027250
OHCN01000031
56493
Bacteroidota
TGA
Ser
>WENV182027251
OHCN01000031
175903
Bacteroidota
GTG
His
>WENV182027359
OHCN01000230
351598
Bacteroidota
CGG
Pro
>WENV182027377
OHCN01000293
351598
Bacteroidota
CGG
Pro
>WENV182027855
OHCN01023263
351598
Bacteroidota
CGG
Pro
>WENV182027256
OHCN01000036
29791
Bacteroidota
GCT
Ser
>WENV182027332
OHCN01000148
56072
Bacteroidota
TAA
Leu
>WENV182027476
OHCN01000839
175902
Bacteroidota
GGC
Ala
>WENV182027257
OHCN01000036
398860
Bacteroidota
CTC
Glu
>WENV182027920
OHCN01037860
280451
Bacteroidota
CGT
Thr
>WENV182027237
OHCN01000022
99847
Bacteroidota
GTA
Tyr
>WENV182027197
OHCN01000001
488746
Bacteroidota
CTG
Gln
>WENV182027287
OHCN01000071
398828
Bacteroidota
CCG
Arg
>WENV182027302
OHCN01000092
176192
Bacteroidota
TCT
Arg
>WENV182027310
OHCN01000112
69204
Bacteroidota
TGA
Ser
>WENV182027344
OHCN01000176
69204
Bacteroidota
TGA
Ser
>WENV182027196
OHCN01000001
280446
Bacteroidota
TTT
Lys
>WENV182027223
OHCN01000011
484496
Bacteroidota
TTG
Gln
>WENV182027248
OHCN01000030
484496
Bacteroidota
TTG
Gln
>WENV182027322
OHCN01000119
27502
Bacteroidota
GGA
Ser
>WENV182027232
OHCN01000019
365112
Bacteroidota
TTT
Lys
>WENV182027291
OHCN01000079
365112
Bacteroidota
TTT
Lys
>WENV182027209
OHCN01000006
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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