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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182044178
OHDR01002920
295385
Bacteroidota
CCA
Trp
>WENV182043997
OHDR01000208
117741
Bacteroidota
TAG
Leu
>WENV182043928
OHDR01000073
398829
Bacteroidota
CCT
Arg
>WENV182044076
OHDR01000687
398829
Bacteroidota
CCT
Arg
>WENV182043962
OHDR01000127
175838
Bacteroidota
GTT
Asn
>WENV182044153
OHDR01001816
404226
Bacteroidota
CCT
Arg
>WENV182044232
OHDR01005467
175904
Bacteroidota
CGG
Pro
>WENV182044037
OHDR01000424
289031
Bacteroidota
CAT
Met
>WENV182043886
OHDR01000018
280553
Bacteroidota
TTT
Lys
>WENV182043936
OHDR01000082
280553
Bacteroidota
TTT
Lys
>WENV182043955
OHDR01000118
280557
Bacteroidota
CAT
Met
>WENV182044031
OHDR01000365
280557
Bacteroidota
CAT
Met
>WENV182043989
OHDR01000181
20492
Bacteroidota
GGA
Ser
>WENV182043944
OHDR01000095
20206
Bacteroidota
GGA
Ser
>WENV182044148
OHDR01001746
483416
Bacteroidota
CTG
Gln
>WENV182044270
OHDR01007064
398871
Bacteroidota
TTC
Glu
>WENV182044013
OHDR01000289
56493
Bacteroidota
TGA
Ser
>WENV182043909
OHDR01000049
175903
Bacteroidota
GTG
His
>WENV182044360
OHDR01014279
118089
Bacteroidota
TAG
Leu
>WENV182044258
OHDR01006766
398872
Bacteroidota
GGT
Thr
>WENV182044321
OHDR01010137
156406
Bacteroidota
TAC
Val
>WENV182044233
OHDR01005467
280530
Bacteroidota
CCA
Trp
>WENV182044338
OHDR01011982
175936
Bacteroidota
CAT
Met
>WENV182044509
OHDR01043939
178907
Bacteroidota
TCT
Arg
>WENV182044393
OHDR01020407
20449
Bacteroidota
GGA
Ser
>WENV182043970
OHDR01000139
57807
Bacteroidota
TGA
Ser
>WENV182043932
OHDR01000078
175902
Bacteroidota
GGC
Ala
>WENV182044306
OHDR01009157
398860
Bacteroidota
CTC
Glu
>WENV182044255
OHDR01006631
480404
Bacteroidota
TTG
Gln
>WENV182044176
OHDR01002856
280451
Bacteroidota
CGT
Thr
>WENV182043927
OHDR01000072
99847
Bacteroidota
GTA
Tyr
>WENV182044003
OHDR01000212
99847
Bacteroidota
GTA
Tyr
>WENV182044257
OHDR01006740
399200
Bacteroidota
CAT
Met
>WENV182043897
OHDR01000032
186874
Bacteroidota
CAT
Met
>WENV182044173
OHDR01002759
399026
Bacteroidota
CCT
Arg
>WENV182044238
OHDR01005618
280478
Bacteroidota
GCC
Gly
>WENV182044433
OHDR01024025
186108
Bacteroidota
GTT
Asn
>WENV182044132
OHDR01001487
175844
Bacteroidota
GGC
Ala
>WENV182044417
OHDR01023267
280532
Bacteroidota
>WENV182044286
OHDR01007781
480318
Bacteroidota
CTG
Gln
>WENV182044468
OHDR01031450
186142
Bacteroidota
GAT
Ile
>WENV182044006
OHDR01000254
398828
Bacteroidota
CCG
Arg
>WENV182044380
OHDR01016690
74084
Bacteroidota
CAG
Leu
>WENV182043929
OHDR01000075
176192
Bacteroidota
TCT
Arg
>WENV182043982
OHDR01000166
280446
Bacteroidota
TTT
Lys
>WENV182044056
OHDR01000537
280446
Bacteroidota
TTT
Lys
>WENV182044303
OHDR01009004
188555
Bacteroidota
CAT
Met
>WENV182044185
OHDR01003168
117804
Bacteroidota
TAG
Leu
>WENV182044469
OHDR01031450
186143
Bacteroidota
TGC
Ala
>WENV182043913
OHDR01000051
398836
Bacteroidota
GCA
Cys
>WENV182043924
OHDR01000068
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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