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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182047436
OHDX01005257
172207
Bacteroidota
GGG
Pro
>WENV182047486
OHDX01008852
351598
Bacteroidota
CGG
Pro
>WENV182047540
OHDX01013435
118089
Bacteroidota
TAG
Leu
>WENV182047623
OHDX01026489
175908
Bacteroidota
GTC
Asp
>WENV182047239
OHDX01000147
157895
Bacteroidota
TAC
Val
>WENV182047535
OHDX01012512
172085
Bacteroidota
TAC
Val
>WENV182047675
OHDX01041101
418894
Bacteroidota
TTC
Glu
>WENV182047350
OHDX01002087
399200
Bacteroidota
CAT
Met
>WENV182047287
OHDX01000734
183889
Bacteroidota
GGC
Ala
>WENV182047537
OHDX01012933
372845
Bacteroidota
CCA
Trp
>WENV182047336
OHDX01001698
69204
Bacteroidota
TGA
Ser
>WENV182047355
OHDX01002334
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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