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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182055547
OHEL01028724
291612
Bacteroidota
>WENV182055193
OHEL01002139
73011
Bacteroidota
CAA
Leu
>WENV182055330
OHEL01006570
74084
Bacteroidota
CAG
Leu
>WENV182054956
OHEL01000176
289031
Bacteroidota
CAT
Met
>WENV182055039
OHEL01000446
280557
Bacteroidota
CAT
Met
>WENV182055288
OHEL01004856
399200
Bacteroidota
CAT
Met
>WENV182055118
OHEL01001011
186874
Bacteroidota
CAT
Met
>WENV182054925
OHEL01000093
295385
Bacteroidota
CCA
Trp
>WENV182055313
OHEL01005949
285750
Bacteroidota
CCC
Gly
>WENV182054893
OHEL01000055
398828
Bacteroidota
CCG
Arg
>WENV182054935
OHEL01000110
398829
Bacteroidota
CCT
Arg
>WENV182055322
OHEL01006215
404226
Bacteroidota
CCT
Arg
>WENV182055495
OHEL01020281
175904
Bacteroidota
CGG
Pro
>WENV182055070
OHEL01000587
351598
Bacteroidota
CGG
Pro
>WENV182055309
OHEL01005716
351598
Bacteroidota
CGG
Pro
>WENV182055046
OHEL01000482
280451
Bacteroidota
CGT
Thr
>WENV182055031
OHEL01000426
483416
Bacteroidota
CTG
Gln
>WENV182055115
OHEL01000982
483416
Bacteroidota
CTG
Gln
>WENV182055084
OHEL01000672
488746
Bacteroidota
CTG
Gln
>WENV182055047
OHEL01000483
480318
Bacteroidota
CTG
Gln
>WENV182055339
OHEL01007022
480325
Bacteroidota
CTG
Gln
>WENV182055576
OHEL01036302
178133
Bacteroidota
GAT
Ile
>WENV182055528
OHEL01026155
186142
Bacteroidota
GAT
Ile
>WENV182054850
OHEL01000018
398836
Bacteroidota
GCA
Cys
>WENV182055243
OHEL01003266
398836
Bacteroidota
GCA
Cys
>WENV182055557
OHEL01030968
280478
Bacteroidota
GCC
Gly
>WENV182055305
OHEL01005372
29791
Bacteroidota
GCT
Ser
>WENV182055168
OHEL01001616
20206
Bacteroidota
GGA
Ser
>WENV182055211
OHEL01002528
20449
Bacteroidota
GGA
Ser
>WENV182054982
OHEL01000228
21127
Bacteroidota
GGA
Ser
>WENV182054852
OHEL01000021
27502
Bacteroidota
GGA
Ser
>WENV182054872
OHEL01000035
27502
Bacteroidota
GGA
Ser
>WENV182055087
OHEL01000748
27502
Bacteroidota
GGA
Ser
>WENV182055174
OHEL01001676
175902
Bacteroidota
GGC
Ala
>WENV182055468
OHEL01016177
175844
Bacteroidota
GGC
Ala
>WENV182055262
OHEL01003796
170323
Bacteroidota
GGG
Pro
>WENV182055076
OHEL01000605
398872
Bacteroidota
GGT
Thr
>WENV182055264
OHEL01003833
405877
Bacteroidota
GGT
Thr
>WENV182054911
OHEL01000067
99847
Bacteroidota
GTA
Tyr
>WENV182055073
OHEL01000598
99847
Bacteroidota
GTA
Tyr
>WENV182055380
OHEL01008732
175906
Bacteroidota
GTG
His
>WENV182055158
OHEL01001499
175903
Bacteroidota
GTG
His
>WENV182054927
OHEL01000097
175838
Bacteroidota
GTT
Asn
>WENV182055321
OHEL01006214
186108
Bacteroidota
GTT
Asn
>WENV182055013
OHEL01000364
56072
Bacteroidota
TAA
Leu
>WENV182054874
OHEL01000039
159415
Bacteroidota
TAC
Val
>WENV182055207
OHEL01002495
117804
Bacteroidota
TAG
Leu
>WENV182055299
OHEL01005171
178907
Bacteroidota
TCT
Arg
>WENV182055403
OHEL01010369
176192
Bacteroidota
TCT
Arg
>WENV182055595
OHEL01042238
176192
Bacteroidota
TCT
Arg
>WENV182055200
OHEL01002374
56493
Bacteroidota
TGA
Ser
>WENV182054851
OHEL01000021
69204
Bacteroidota
TGA
Ser
>WENV182054853
OHEL01000021
69204
Bacteroidota
TGA
Ser
>WENV182055529
OHEL01026155
186143
Bacteroidota
TGC
Ala
>WENV182055282
OHEL01004579
398871
Bacteroidota
TTC
Glu
>WENV182055616
OHEL01046908
418894
Bacteroidota
TTC
Glu
>WENV182054837
OHEL01000001
480404
Bacteroidota
TTG
Gln
>WENV182054983
OHEL01000229
484496
Bacteroidota
TTG
Gln
>WENV182055172
OHEL01001667
484496
Bacteroidota
TTG
Gln
>WENV182055061
OHEL01000551
285360
Bacteroidota
TTT
Lys
>WENV182054888
OHEL01000051
280446
Bacteroidota
TTT
Lys
>WENV182054920
OHEL01000084
280446
Bacteroidota
TTT
Lys
>WENV182055068
OHEL01000585
280446
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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