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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182135325
OHKJ01000001
144933
Bacteroidota
TCT
Arg
>WENV182135331
OHKJ01000002
235097
Bacteroidota
TTT
Lys
>WENV182135332
OHKJ01000002
419272
Bacteroidota
CTG
Gln
>WENV182135333
OHKJ01000002
16220
Bacteroidota
GGA
Ser
>WENV182135335
OHKJ01000003
144596
Bacteroidota
GGC
Ala
>WENV182135336
OHKJ01000004
80607
Bacteroidota
GTA
Tyr
>WENV182135350
OHKJ01000013
95618
Bacteroidota
TAG
Leu
>WENV182135351
OHKJ01000014
411543
Bacteroidota
CTG
Gln
>WENV182135354
OHKJ01000015
144655
Bacteroidota
GGC
Ala
>WENV182135356
OHKJ01000016
338124
Bacteroidota
CCG
Arg
>WENV182135359
OHKJ01000021
48053
Bacteroidota
TGA
Ser
>WENV182135360
OHKJ01000021
48053
Bacteroidota
TGA
Ser
>WENV182135361
OHKJ01000021
338132
Bacteroidota
GCA
Cys
>WENV182135367
OHKJ01000022
80835
Bacteroidota
GTA
Tyr
>WENV182135370
OHKJ01000022
154643
Bacteroidota
CAT
Met
>WENV182135371
OHKJ01000023
338314
Bacteroidota
CCT
Arg
>WENV182135395
OHKJ01000046
144688
Bacteroidota
CAT
Met
>WENV182135400
OHKJ01000048
338132
Bacteroidota
GCA
Cys
>WENV182135402
OHKJ01000056
95559
Bacteroidota
TAG
Leu
>WENV182135419
OHKJ01000071
144656
Bacteroidota
GTG
His
>WENV182135422
OHKJ01000076
338155
Bacteroidota
CTC
Glu
>WENV182135425
OHKJ01000080
235207
Bacteroidota
CAT
Met
>WENV182135427
OHKJ01000082
235182
Bacteroidota
>WENV182135444
OHKJ01000107
80607
Bacteroidota
GTA
Tyr
>WENV182135460
OHKJ01000146
353927
Bacteroidota
TTC
Glu
>WENV182135478
OHKJ01000194
243025
Bacteroidota
CAT
Met
>WENV182135496
OHKJ01000231
338132
Bacteroidota
GCA
Cys
>WENV182135505
OHKJ01000271
414426
Bacteroidota
CTG
Gln
>WENV182135506
OHKJ01000282
411629
Bacteroidota
TTG
Gln
>WENV182135519
OHKJ01000321
235102
Bacteroidota
CGT
Thr
>WENV182135548
OHKJ01000443
415410
Bacteroidota
TTG
Gln
>WENV182135555
OHKJ01000468
48053
Bacteroidota
TGA
Ser
>WENV182135556
OHKJ01000470
415410
Bacteroidota
TTG
Gln
>WENV182135698
OHKJ01001814
415410
Bacteroidota
TTG
Gln
>WENV182135717
OHKJ01002305
343138
Bacteroidota
CCT
Arg
>WENV182135745
OHKJ01002935
126641
Bacteroidota
TAC
Val
>WENV182135832
OHKJ01005792
235203
Bacteroidota
TTT
Lys
>WENV182135852
OHKJ01006709
16224
Bacteroidota
GGA
Ser
>WENV182136007
OHKJ01022149
240012
Bacteroidota
CCC
Gly
>WENV182136012
OHKJ01023043
151121
Bacteroidota
CAT
Met
>WENV182136046
OHKJ01028417
235129
Bacteroidota
GCC
Gly
>WENV182136123
OHKJ01043906
147439
Bacteroidota
TCT
Arg
>WENV182136145
OHKJ01048656
238121
Bacteroidota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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