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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182148561
OHLF01000575
117741
Bacteroidota
TAG
Leu
>WENV182148505
OHLF01000253
398829
Bacteroidota
CCT
Arg
>WENV182148370
OHLF01000029
400161
Bacteroidota
GGT
Thr
>WENV182148637
OHLF01001448
289031
Bacteroidota
CAT
Met
>WENV182148500
OHLF01000215
156422
Bacteroidota
TAC
Val
>WENV182148501
OHLF01000215
156422
Bacteroidota
TAC
Val
>WENV182148940
OHLF01017086
280557
Bacteroidota
CAT
Met
>WENV182148700
OHLF01002882
20206
Bacteroidota
GGA
Ser
>WENV182148769
OHLF01004623
483416
Bacteroidota
CTG
Gln
>WENV182148473
OHLF01000158
118221
Bacteroidota
CAA
Leu
>WENV182148667
OHLF01002170
175903
Bacteroidota
GTG
His
>WENV182148562
OHLF01000577
351598
Bacteroidota
CGG
Pro
>WENV182148946
OHLF01018038
175908
Bacteroidota
GTC
Asp
>WENV182148893
OHLF01011600
178571
Bacteroidota
GTT
Asn
>WENV182148863
OHLF01009273
178907
Bacteroidota
TCT
Arg
>WENV182148415
OHLF01000065
56385
Bacteroidota
TGA
Ser
>WENV182148371
OHLF01000029
312035
Bacteroidota
CCA
Trp
>WENV182148361
OHLF01000025
242241
Bacteroidota
GTC
Asp
>WENV182148741
OHLF01003737
280451
Bacteroidota
CGT
Thr
>WENV182148713
OHLF01003039
99847
Bacteroidota
GTA
Tyr
>WENV182148447
OHLF01000096
404109
Bacteroidota
CTC
Glu
>WENV182148448
OHLF01000096
404109
Bacteroidota
CTC
Glu
>WENV182148933
OHLF01015644
186874
Bacteroidota
CAT
Met
>WENV182148423
OHLF01000073
46648
Bacteroidota
TAA
Leu
>WENV182148823
OHLF01006370
488746
Bacteroidota
CTG
Gln
>WENV182148636
OHLF01001438
183889
Bacteroidota
GGC
Ala
>WENV182148596
OHLF01001040
398828
Bacteroidota
CCG
Arg
>WENV182148425
OHLF01000073
481328
Bacteroidota
TTG
Gln
>WENV182148517
OHLF01000294
69204
Bacteroidota
TGA
Ser
>WENV182148630
OHLF01001397
484496
Bacteroidota
TTG
Gln
>WENV182148895
OHLF01011858
27502
Bacteroidota
GGA
Ser
>WENV182148971
OHLF01020138
365112
Bacteroidota
TTT
Lys
>WENV182148582
OHLF01000807
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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