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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182150194
OHLI01000352
295385
Bacteroidota
CCA
Trp
>WENV182150215
OHLI01000442
117741
Bacteroidota
TAG
Leu
>WENV182150383
OHLI01001902
398829
Bacteroidota
CCT
Arg
>WENV182150127
OHLI01000128
175838
Bacteroidota
GTT
Asn
>WENV182150348
OHLI01001505
289031
Bacteroidota
CAT
Met
>WENV182150283
OHLI01000950
280557
Bacteroidota
CAT
Met
>WENV182150231
OHLI01000570
20206
Bacteroidota
GGA
Ser
>WENV182150495
OHLI01003557
483416
Bacteroidota
CTG
Gln
>WENV182150143
OHLI01000184
175903
Bacteroidota
GTG
His
>WENV182150162
OHLI01000239
351598
Bacteroidota
CGG
Pro
>WENV182150754
OHLI01018370
398872
Bacteroidota
GGT
Thr
>WENV182150165
OHLI01000258
57807
Bacteroidota
TGA
Ser
>WENV182150167
OHLI01000258
57807
Bacteroidota
TGA
Ser
>WENV182150352
OHLI01001534
57807
Bacteroidota
TGA
Ser
>WENV182150589
OHLI01006573
175902
Bacteroidota
GGC
Ala
>WENV182150320
OHLI01001306
280451
Bacteroidota
CGT
Thr
>WENV182150270
OHLI01000827
99847
Bacteroidota
GTA
Tyr
>WENV182150362
OHLI01001637
186874
Bacteroidota
CAT
Met
>WENV182150804
OHLI01026950
46648
Bacteroidota
TAA
Leu
>WENV182150209
OHLI01000401
488746
Bacteroidota
CTG
Gln
>WENV182150175
OHLI01000298
158068
Bacteroidota
GGG
Pro
>WENV182150188
OHLI01000340
159415
Bacteroidota
TAC
Val
>WENV182150039
OHLI01000002
484496
Bacteroidota
TTG
Gln
>WENV182150150
OHLI01000194
484496
Bacteroidota
TTG
Gln
>WENV182150073
OHLI01000026
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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