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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182200639
OHPL01001920
235102
Bacteroidota
CGT
Thr
>WENV182200281
OHPL01000213
144657
Bacteroidota
CGG
Pro
>WENV182200407
OHPL01000487
243025
Bacteroidota
CAT
Met
>WENV182200905
OHPL01009215
338155
Bacteroidota
CTC
Glu
>WENV182200520
OHPL01001025
343138
Bacteroidota
CCT
Arg
>WENV182200398
OHPL01000447
58715
Bacteroidota
GAG
Leu
>WENV182200844
OHPL01006249
46165
Bacteroidota
TGA
Ser
>WENV182200731
OHPL01003472
17323
Bacteroidota
GGA
Ser
>WENV182200516
OHPL01001000
338486
Bacteroidota
CAT
Met
>WENV182200203
OHPL01000066
338486
Bacteroidota
CAT
Met
>WENV182200238
OHPL01000120
59689
Bacteroidota
CAG
Leu
>WENV182200641
OHPL01001985
436206
Bacteroidota
TTG
Gln
>WENV182200812
OHPL01005386
20893
Bacteroidota
GGA
Ser
>WENV182200883
OHPL01008165
344692
Bacteroidota
GGT
Thr
>WENV182200390
OHPL01000420
235203
Bacteroidota
TTT
Lys
>WENV182200227
OHPL01000109
235203
Bacteroidota
TTT
Lys
>WENV182200625
OHPL01001780
238121
Bacteroidota
CTT
Lys
>WENV182201045
OHPL01018832
126641
Bacteroidota
TAC
Val
>WENV182200604
OHPL01001592
338132
Bacteroidota
GCA
Cys
>WENV182200363
OHPL01000387
338132
Bacteroidota
GCA
Cys
>WENV182200626
OHPL01001780
45423
Bacteroidota
TGA
Ser
>WENV182200234
OHPL01000117
58714
Bacteroidota
CAA
Leu
>WENV182200804
OHPL01004829
301449
Bacteroidota
CGG
Pro
>WENV182200111
OHPL01000008
301449
Bacteroidota
CGG
Pro
>WENV182200621
OHPL01001745
144656
Bacteroidota
GTG
His
>WENV182200605
OHPL01001609
235207
Bacteroidota
CAT
Met
>WENV182200225
OHPL01000106
144659
Bacteroidota
GTG
His
>WENV182200282
OHPL01000213
235180
Bacteroidota
CCA
Trp
>WENV182200337
OHPL01000306
80607
Bacteroidota
GTA
Tyr
>WENV182200691
OHPL01002677
154643
Bacteroidota
CAT
Met
>WENV182200598
OHPL01001485
95559
Bacteroidota
TAG
Leu
>WENV182200897
OHPL01008922
144655
Bacteroidota
GGC
Ala
>WENV182200249
OHPL01000155
338164
Bacteroidota
TTC
Glu
>WENV182200339
OHPL01000312
95875
Bacteroidota
TAG
Leu
>WENV182200247
OHPL01000149
139743
Bacteroidota
GGG
Pro
>WENV182200772
OHPL01004489
240012
Bacteroidota
CCC
Gly
>WENV182200228
OHPL01000110
240012
Bacteroidota
CCC
Gly
>WENV182200200
OHPL01000063
44852
Bacteroidota
TAA
Leu
>WENV182200229
OHPL01000110
147439
Bacteroidota
TCT
Arg
>WENV182200209
OHPL01000084
411550
Bacteroidota
CTG
Gln
>WENV182200114
OHPL01000009
425638
Bacteroidota
CTG
Gln
>WENV182200828
OHPL01005737
353927
Bacteroidota
TTC
Glu
>WENV182200189
OHPL01000052
185921
Bacteroidota
GTC
Asp
>WENV182200481
OHPL01000801
23696
Bacteroidota
GCT
Ser
>WENV182200861
OHPL01007223
414426
Bacteroidota
CTG
Gln
>WENV182200402
OHPL01000460
414426
Bacteroidota
CTG
Gln
>WENV182200778
OHPL01004581
55270
Bacteroidota
TGA
Ser
>WENV182200338
OHPL01000308
16224
Bacteroidota
GGA
Ser
>WENV182200306
OHPL01000245
16220
Bacteroidota
GGA
Ser
>WENV182200703
OHPL01002972
338125
Bacteroidota
CCT
Arg
>WENV182200289
OHPL01000222
235129
Bacteroidota
GCC
Gly
>WENV182201035
OHPL01017652
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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