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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182205164
OHPS01000211
117741
Bacteroidota
TAG
Leu
>WENV182205122
OHPS01000093
398829
Bacteroidota
CCT
Arg
>WENV182205277
OHPS01000978
398829
Bacteroidota
CCT
Arg
>WENV182205123
OHPS01000099
175838
Bacteroidota
GTT
Asn
>WENV182205370
OHPS01003249
404226
Bacteroidota
CCT
Arg
>WENV182205317
OHPS01001890
289031
Bacteroidota
CAT
Met
>WENV182205305
OHPS01001432
280553
Bacteroidota
TTT
Lys
>WENV182205020
OHPS01000003
280557
Bacteroidota
CAT
Met
>WENV182205147
OHPS01000157
20492
Bacteroidota
GGA
Ser
>WENV182205185
OHPS01000285
20206
Bacteroidota
GGA
Ser
>WENV182205417
OHPS01004792
483416
Bacteroidota
CTG
Gln
>WENV182205369
OHPS01003249
398871
Bacteroidota
TTC
Glu
>WENV182205316
OHPS01001846
175906
Bacteroidota
GTG
His
>WENV182205096
OHPS01000058
175903
Bacteroidota
GTG
His
>WENV182205106
OHPS01000074
351598
Bacteroidota
CGG
Pro
>WENV182205175
OHPS01000245
351598
Bacteroidota
CGG
Pro
>WENV182205413
OHPS01004671
118089
Bacteroidota
TAG
Leu
>WENV182205446
OHPS01006205
280530
Bacteroidota
CCA
Trp
>WENV182205301
OHPS01001371
203954
Bacteroidota
GTC
Asp
>WENV182205302
OHPS01001371
203954
Bacteroidota
GTC
Asp
>WENV182205292
OHPS01001194
178907
Bacteroidota
TCT
Arg
>WENV182205299
OHPS01001351
20449
Bacteroidota
GGA
Ser
>WENV182205328
OHPS01002194
21127
Bacteroidota
GGA
Ser
>WENV182205282
OHPS01001040
175902
Bacteroidota
GGC
Ala
>WENV182205085
OHPS01000047
480404
Bacteroidota
TTG
Gln
>WENV182205173
OHPS01000244
280451
Bacteroidota
CGT
Thr
>WENV182205056
OHPS01000022
99847
Bacteroidota
GTA
Tyr
>WENV182205264
OHPS01000883
99847
Bacteroidota
GTA
Tyr
>WENV182205321
OHPS01002071
399200
Bacteroidota
CAT
Met
>WENV182205393
OHPS01004295
186874
Bacteroidota
CAT
Met
>WENV182205144
OHPS01000139
488746
Bacteroidota
CTG
Gln
>WENV182205544
OHPS01015704
399026
Bacteroidota
CCT
Arg
>WENV182205304
OHPS01001425
280478
Bacteroidota
GCC
Gly
>WENV182205218
OHPS01000454
175844
Bacteroidota
GGC
Ala
>WENV182205219
OHPS01000466
73011
Bacteroidota
CAA
Leu
>WENV182205021
OHPS01000004
398828
Bacteroidota
CCG
Arg
>WENV182205416
OHPS01004768
74084
Bacteroidota
CAG
Leu
>WENV182205337
OHPS01002360
480325
Bacteroidota
CTG
Gln
>WENV182205187
OHPS01000301
176192
Bacteroidota
TCT
Arg
>WENV182205119
OHPS01000089
69204
Bacteroidota
TGA
Ser
>WENV182205124
OHPS01000100
69204
Bacteroidota
TGA
Ser
>WENV182205026
OHPS01000009
280446
Bacteroidota
TTT
Lys
>WENV182205075
OHPS01000033
280446
Bacteroidota
TTT
Lys
>WENV182205103
OHPS01000066
484496
Bacteroidota
TTG
Gln
>WENV182205211
OHPS01000392
484496
Bacteroidota
TTG
Gln
>WENV182205493
OHPS01010401
285750
Bacteroidota
CCC
Gly
>WENV182205125
OHPS01000103
365112
Bacteroidota
TTT
Lys
>WENV182205023
OHPS01000006
398836
Bacteroidota
GCA
Cys
>WENV182205135
OHPS01000124
398836
Bacteroidota
GCA
Cys
>WENV182205102
OHPS01000063
170323
Bacteroidota
GGG
Pro
>WENV182205238
OHPS01000723
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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