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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182209968
OHQB01000076
235097
Bacteroidota
TTT
Lys
>WENV182209972
OHQB01000093
235097
Bacteroidota
TTT
Lys
>WENV182209980
OHQB01000154
235102
Bacteroidota
CGT
Thr
>WENV182209967
OHQB01000072
338155
Bacteroidota
CTC
Glu
>WENV182210041
OHQB01001800
95618
Bacteroidota
TAG
Leu
>WENV182209958
OHQB01000023
415410
Bacteroidota
TTG
Gln
>WENV182209985
OHQB01000203
415410
Bacteroidota
TTG
Gln
>WENV182210027
OHQB01000984
411543
Bacteroidota
CTG
Gln
>WENV182209994
OHQB01000289
338124
Bacteroidota
CCG
Arg
>WENV182210033
OHQB01001341
126641
Bacteroidota
TAC
Val
>WENV182209948
OHQB01000018
338132
Bacteroidota
GCA
Cys
>WENV182209924
OHQB01000004
338132
Bacteroidota
GCA
Cys
>WENV182209933
OHQB01000008
193809
Bacteroidota
CAT
Met
>WENV182209936
OHQB01000010
144656
Bacteroidota
GTG
His
>WENV182210057
OHQB01003034
235207
Bacteroidota
CAT
Met
>WENV182209963
OHQB01000058
144596
Bacteroidota
GGC
Ala
>WENV182209982
OHQB01000156
80607
Bacteroidota
GTA
Tyr
>WENV182209954
OHQB01000021
80607
Bacteroidota
GTA
Tyr
>WENV182209996
OHQB01000292
52358
Bacteroidota
TGA
Ser
>WENV182209992
OHQB01000258
52358
Bacteroidota
TGA
Ser
>WENV182209935
OHQB01000010
52358
Bacteroidota
TGA
Ser
>WENV182210101
OHQB01015045
154643
Bacteroidota
CAT
Met
>WENV182209952
OHQB01000021
144590
Bacteroidota
GTT
Asn
>WENV182209951
OHQB01000021
144590
Bacteroidota
GTT
Asn
>WENV182209977
OHQB01000123
95559
Bacteroidota
TAG
Leu
>WENV182209965
OHQB01000065
419272
Bacteroidota
CTG
Gln
>WENV182210003
OHQB01000509
144655
Bacteroidota
GGC
Ala
>WENV182209981
OHQB01000155
132360
Bacteroidota
GGG
Pro
>WENV182209957
OHQB01000022
132360
Bacteroidota
GGG
Pro
>WENV182210020
OHQB01000612
425638
Bacteroidota
CTG
Gln
>WENV182209931
OHQB01000007
23696
Bacteroidota
GCT
Ser
>WENV182210002
OHQB01000503
48914
Bacteroidota
TGA
Ser
>WENV182209937
OHQB01000010
16224
Bacteroidota
GGA
Ser
>WENV182209970
OHQB01000082
16220
Bacteroidota
GGA
Ser
>WENV182210016
OHQB01000571
338125
Bacteroidota
CCT
Arg
>WENV182209961
OHQB01000046
338125
Bacteroidota
CCT
Arg
>WENV182210019
OHQB01000609
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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