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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182221520
OHQT01001266
58714
Bacteroidota
CAA
Leu
>WENV182221278
OHQT01000129
59689
Bacteroidota
CAG
Leu
>WENV182221866
OHQT01019040
243025
Bacteroidota
CAT
Met
>WENV182221326
OHQT01000246
144695
Bacteroidota
CAT
Met
>WENV182221225
OHQT01000047
235207
Bacteroidota
CAT
Met
>WENV182221254
OHQT01000075
338124
Bacteroidota
CCG
Arg
>WENV182221200
OHQT01000023
338125
Bacteroidota
CCT
Arg
>WENV182221536
OHQT01001395
144657
Bacteroidota
CGG
Pro
>WENV182221372
OHQT01000379
238606
Bacteroidota
CGG
Pro
>WENV182221424
OHQT01000677
235102
Bacteroidota
CGT
Thr
>WENV182221334
OHQT01000275
344769
Bacteroidota
CTC
Glu
>WENV182221394
OHQT01000521
419272
Bacteroidota
CTG
Gln
>WENV182221277
OHQT01000127
419272
Bacteroidota
CTG
Gln
>WENV182221274
OHQT01000123
414426
Bacteroidota
CTG
Gln
>WENV182221597
OHQT01002097
58715
Bacteroidota
GAG
Leu
>WENV182221443
OHQT01000764
338132
Bacteroidota
GCA
Cys
>WENV182221401
OHQT01000544
338132
Bacteroidota
GCA
Cys
>WENV182221440
OHQT01000743
235129
Bacteroidota
GCC
Gly
>WENV182221385
OHQT01000448
16224
Bacteroidota
GGA
Ser
>WENV182221611
OHQT01002377
144655
Bacteroidota
GGC
Ala
>WENV182221289
OHQT01000147
151960
Bacteroidota
GGC
Ala
>WENV182221339
OHQT01000292
80835
Bacteroidota
GTA
Tyr
>WENV182221564
OHQT01001697
80607
Bacteroidota
GTA
Tyr
>WENV182221902
OHQT01025115
147147
Bacteroidota
GTG
His
>WENV182221268
OHQT01000111
144656
Bacteroidota
GTG
His
>WENV182221352
OHQT01000327
155123
Bacteroidota
GTT
Asn
>WENV182221228
OHQT01000050
149691
Bacteroidota
GTT
Asn
>WENV182221285
OHQT01000143
144590
Bacteroidota
GTT
Asn
>WENV182221494
OHQT01001096
37076
Bacteroidota
TAA
Leu
>WENV182221459
OHQT01000861
95559
Bacteroidota
TAG
Leu
>WENV182221375
OHQT01000397
95875
Bacteroidota
TAG
Leu
>WENV182221507
OHQT01001141
147439
Bacteroidota
TCT
Arg
>WENV182221478
OHQT01001005
48053
Bacteroidota
TGA
Ser
>WENV182221387
OHQT01000474
167013
Bacteroidota
TGG
Pro
>WENV182221758
OHQT01007278
353927
Bacteroidota
TTC
Glu
>WENV182221368
OHQT01000372
353927
Bacteroidota
TTC
Glu
>WENV182221269
OHQT01000113
415410
Bacteroidota
TTG
Gln
>WENV182221356
OHQT01000345
415558
Bacteroidota
TTG
Gln
>WENV182221201
OHQT01000026
235097
Bacteroidota
TTT
Lys
>WENV182221457
OHQT01000857
235097
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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