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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182226356
OHRF01000006
147147
Bacteroidota
GTG
His
>WENV182226382
OHRF01000021
80607
Bacteroidota
GTA
Tyr
>WENV182226385
OHRF01000022
412479
Bacteroidota
TTG
Gln
>WENV182226386
OHRF01000023
338125
Bacteroidota
CCT
Arg
>WENV182226414
OHRF01000051
338124
Bacteroidota
CCG
Arg
>WENV182226417
OHRF01000059
55270
Bacteroidota
TGA
Ser
>WENV182226418
OHRF01000059
144656
Bacteroidota
GTG
His
>WENV182226421
OHRF01000061
16220
Bacteroidota
GGA
Ser
>WENV182226422
OHRF01000061
139743
Bacteroidota
GGG
Pro
>WENV182226423
OHRF01000062
413663
Bacteroidota
CTG
Gln
>WENV182226449
OHRF01000095
436206
Bacteroidota
TTG
Gln
>WENV182226455
OHRF01000100
339412
Bacteroidota
GGT
Thr
>WENV182226456
OHRF01000100
237797
Bacteroidota
CCA
Trp
>WENV182226460
OHRF01000103
235207
Bacteroidota
CAT
Met
>WENV182226463
OHRF01000108
95559
Bacteroidota
TAG
Leu
>WENV182226479
OHRF01000123
196394
Bacteroidota
GTC
Asp
>WENV182226481
OHRF01000129
136244
Bacteroidota
TAC
Val
>WENV182226485
OHRF01000138
16224
Bacteroidota
GGA
Ser
>WENV182226486
OHRF01000141
95987
Bacteroidota
CAA
Leu
>WENV182226508
OHRF01000174
144590
Bacteroidota
GTT
Asn
>WENV182226510
OHRF01000177
313363
Bacteroidota
GAA
Phe
>WENV182226527
OHRF01000215
394247
Bacteroidota
CTC
Glu
>WENV182226529
OHRF01000234
313363
Bacteroidota
GAA
Phe
>WENV182226565
OHRF01000342
144655
Bacteroidota
GGC
Ala
>WENV182226585
OHRF01000486
55270
Bacteroidota
TGA
Ser
>WENV182226598
OHRF01000583
338132
Bacteroidota
GCA
Cys
>WENV182226614
OHRF01000688
235097
Bacteroidota
TTT
Lys
>WENV182226699
OHRF01001801
97336
Bacteroidota
CAG
Leu
>WENV182226797
OHRF01004531
127023
Bacteroidota
GGG
Pro
>WENV182226845
OHRF01006168
243025
Bacteroidota
CAT
Met
>WENV182226850
OHRF01006470
20893
Bacteroidota
GGA
Ser
>WENV182226905
OHRF01010052
175704
Bacteroidota
TGC
Ala
>WENV182226912
OHRF01010946
237796
Bacteroidota
CGT
Thr
>WENV182226924
OHRF01012524
146764
Bacteroidota
GTC
Asp
>WENV182226925
OHRF01012524
146764
Bacteroidota
GTC
Asp
>WENV182226943
OHRF01013824
394247
Bacteroidota
CTC
Glu
>WENV182226965
OHRF01015506
17323
Bacteroidota
GGA
Ser
>WENV182226974
OHRF01016312
146800
Bacteroidota
>WENV182226981
OHRF01016695
338164
Bacteroidota
TTC
Glu
>WENV182226983
OHRF01016895
235165
Bacteroidota
CCA
Trp
>WENV182226988
OHRF01017107
235102
Bacteroidota
CGT
Thr
>WENV182227030
OHRF01025157
80614
Bacteroidota
>WENV182227051
OHRF01028438
353927
Bacteroidota
TTC
Glu
>WENV182227092
OHRF01034901
414426
Bacteroidota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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