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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182231917
OHRN01000002
280446
Bacteroidota
TTT
Lys
>WENV182231920
OHRN01000005
398829
Bacteroidota
CCT
Arg
>WENV182231922
OHRN01000006
46648
Bacteroidota
TAA
Leu
>WENV182231921
OHRN01000006
481328
Bacteroidota
TTG
Gln
>WENV182231924
OHRN01000007
56493
Bacteroidota
TGA
Ser
>WENV182231925
OHRN01000007
175903
Bacteroidota
GTG
His
>WENV182231929
OHRN01000009
187814
Bacteroidota
GTC
Asp
>WENV182231931
OHRN01000011
56385
Bacteroidota
TGA
Ser
>WENV182231933
OHRN01000013
176192
Bacteroidota
TCT
Arg
>WENV182231935
OHRN01000014
280451
Bacteroidota
CGT
Thr
>WENV182231938
OHRN01000020
398828
Bacteroidota
CCG
Arg
>WENV182231946
OHRN01000038
488746
Bacteroidota
CTG
Gln
>WENV182231954
OHRN01000057
118089
Bacteroidota
TAG
Leu
>WENV182231957
OHRN01000059
400161
Bacteroidota
GGT
Thr
>WENV182231958
OHRN01000059
283316
Bacteroidota
CCA
Trp
>WENV182231965
OHRN01000079
175902
Bacteroidota
GGC
Ala
>WENV182231980
OHRN01000110
117741
Bacteroidota
TAG
Leu
>WENV182231983
OHRN01000121
484496
Bacteroidota
TTG
Gln
>WENV182231986
OHRN01000137
99847
Bacteroidota
GTA
Tyr
>WENV182231991
OHRN01000173
118221
Bacteroidota
CAA
Leu
>WENV182231992
OHRN01000174
399200
Bacteroidota
CAT
Met
>WENV182232001
OHRN01000197
398836
Bacteroidota
GCA
Cys
>WENV182232017
OHRN01000267
57807
Bacteroidota
TGA
Ser
>WENV182232018
OHRN01000273
398836
Bacteroidota
GCA
Cys
>WENV182232020
OHRN01000298
156422
Bacteroidota
TAC
Val
>WENV182232031
OHRN01000379
203954
Bacteroidota
GTC
Asp
>WENV182232062
OHRN01000691
280553
Bacteroidota
TTT
Lys
>WENV182232065
OHRN01000699
285750
Bacteroidota
CCC
Gly
>WENV182232070
OHRN01000772
187814
Bacteroidota
GTC
Asp
>WENV182232074
OHRN01000814
404109
Bacteroidota
CTC
Glu
>WENV182232097
OHRN01001079
404109
Bacteroidota
CTC
Glu
>WENV182232107
OHRN01001215
398836
Bacteroidota
GCA
Cys
>WENV182232109
OHRN01001265
480404
Bacteroidota
TTG
Gln
>WENV182232111
OHRN01001298
159415
Bacteroidota
TAC
Val
>WENV182232119
OHRN01001460
175904
Bacteroidota
CGG
Pro
>WENV182232122
OHRN01001541
280478
Bacteroidota
GCC
Gly
>WENV182232132
OHRN01001995
285360
Bacteroidota
TTT
Lys
>WENV182232145
OHRN01002346
404226
Bacteroidota
CCT
Arg
>WENV182232144
OHRN01002346
398871
Bacteroidota
TTC
Glu
>WENV182232157
OHRN01002713
178907
Bacteroidota
TCT
Arg
>WENV182232161
OHRN01002968
20766
Bacteroidota
GGA
Ser
>WENV182232173
OHRN01003361
74084
Bacteroidota
CAG
Leu
>WENV182232182
OHRN01003553
20449
Bacteroidota
GGA
Ser
>WENV182232193
OHRN01004254
73011
Bacteroidota
CAA
Leu
>WENV182232274
OHRN01009622
400088
Bacteroidota
GGT
Thr
>WENV182232293
OHRN01014624
289031
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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