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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182267005
OHTZ01001335
74084
Bacteroidota
CAG
Leu
>WENV182267145
OHTZ01003612
289031
Bacteroidota
CAT
Met
>WENV182266854
OHTZ01000309
280557
Bacteroidota
CAT
Met
>WENV182267082
OHTZ01002347
186874
Bacteroidota
CAT
Met
>WENV182266845
OHTZ01000278
398828
Bacteroidota
CCG
Arg
>WENV182266946
OHTZ01000777
280451
Bacteroidota
CGT
Thr
>WENV182266986
OHTZ01001067
488746
Bacteroidota
CTG
Gln
>WENV182267233
OHTZ01007332
178133
Bacteroidota
GAT
Ile
>WENV182267080
OHTZ01002281
398836
Bacteroidota
GCA
Cys
>WENV182267109
OHTZ01003000
398836
Bacteroidota
GCA
Cys
>WENV182266865
OHTZ01000359
158068
Bacteroidota
GGG
Pro
>WENV182266908
OHTZ01000527
99847
Bacteroidota
GTA
Tyr
>WENV182266947
OHTZ01000778
99847
Bacteroidota
GTA
Tyr
>WENV182266944
OHTZ01000764
175903
Bacteroidota
GTG
His
>WENV182266855
OHTZ01000310
182267
Bacteroidota
GTT
Asn
>WENV182267199
OHTZ01005786
187400
Bacteroidota
GTT
Asn
>WENV182267112
OHTZ01003062
56072
Bacteroidota
TAA
Leu
>WENV182267129
OHTZ01003440
56072
Bacteroidota
TAA
Leu
>WENV182266937
OHTZ01000714
156068
Bacteroidota
TAC
Val
>WENV182267253
OHTZ01008848
159415
Bacteroidota
TAC
Val
>WENV182267342
OHTZ01014944
117741
Bacteroidota
TAG
Leu
>WENV182266780
OHTZ01000097
57807
Bacteroidota
TGA
Ser
>WENV182266873
OHTZ01000378
57807
Bacteroidota
TGA
Ser
>WENV182266936
OHTZ01000711
57807
Bacteroidota
TGA
Ser
>WENV182266966
OHTZ01000917
57807
Bacteroidota
TGA
Ser
>WENV182266989
OHTZ01001113
57807
Bacteroidota
TGA
Ser
>WENV182267044
OHTZ01001908
57807
Bacteroidota
TGA
Ser
>WENV182267311
OHTZ01012114
418894
Bacteroidota
TTC
Glu
>WENV182266955
OHTZ01000803
484496
Bacteroidota
TTG
Gln
>WENV182266971
OHTZ01000971
285360
Bacteroidota
TTT
Lys
>WENV182266796
OHTZ01000149
332896
Bacteroidota
TTT
Lys
>WENV182266992
OHTZ01001206
332896
Bacteroidota
TTT
Lys
>WENV182267090
OHTZ01002517
332896
Bacteroidota
TTT
Lys
>WENV182267150
OHTZ01003766
280446
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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