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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182305663
OHXC01000007
37076
Bacteroidota
TAA
Leu
>WENV182305708
OHXC01000021
37076
Bacteroidota
TAA
Leu
>WENV182305715
OHXC01000023
146762
Bacteroidota
TGG
Pro
>WENV182305736
OHXC01000034
412479
Bacteroidota
TTG
Gln
>WENV182305737
OHXC01000035
126966
Bacteroidota
TAC
Val
>WENV182305739
OHXC01000037
238606
Bacteroidota
CGG
Pro
>WENV182305758
OHXC01000051
238607
Bacteroidota
TTT
Lys
>WENV182305794
OHXC01000081
167013
Bacteroidota
TGG
Pro
>WENV182305796
OHXC01000083
144695
Bacteroidota
CAT
Met
>WENV182305821
OHXC01000108
136207
Bacteroidota
TAC
Val
>WENV182305822
OHXC01000108
155123
Bacteroidota
GTT
Asn
>WENV182305829
OHXC01000117
419272
Bacteroidota
CTG
Gln
>WENV182305838
OHXC01000134
415558
Bacteroidota
TTG
Gln
>WENV182305886
OHXC01000217
339412
Bacteroidota
GGT
Thr
>WENV182305933
OHXC01000441
414426
Bacteroidota
CTG
Gln
>WENV182306036
OHXC01001253
411629
Bacteroidota
TTG
Gln
>WENV182306050
OHXC01001367
235182
Bacteroidota
>WENV182306196
OHXC01005569
146761
Bacteroidota
GAT
Ile
>WENV182306220
OHXC01007216
353927
Bacteroidota
TTC
Glu
>WENV182306235
OHXC01007834
80607
Bacteroidota
GTA
Tyr
>WENV182306246
OHXC01008598
19317
Bacteroidota
GGA
Ser
>WENV182306266
OHXC01009993
338132
Bacteroidota
GCA
Cys
>WENV182306312
OHXC01014870
52358
Bacteroidota
TGA
Ser
>WENV182306317
OHXC01015096
95618
Bacteroidota
TAG
Leu
>WENV182306325
OHXC01016113
235207
Bacteroidota
CAT
Met
>WENV182306347
OHXC01019499
144688
Bacteroidota
CAT
Met
>WENV182306387
OHXC01025574
272983
Bacteroidota
CGT
Thr
>WENV182306390
OHXC01026910
144933
Bacteroidota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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