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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182424293
OIHE01000865
235102
Bacteroidota
CGT
Thr
>WENV182424357
OIHE01005061
144657
Bacteroidota
CGG
Pro
>WENV182424157
OIHE01000001
338155
Bacteroidota
CTC
Glu
>WENV182424337
OIHE01004077
343138
Bacteroidota
CCT
Arg
>WENV182424359
OIHE01005342
58715
Bacteroidota
GAG
Leu
>WENV182424363
OIHE01006373
95618
Bacteroidota
TAG
Leu
>WENV182424323
OIHE01002199
338486
Bacteroidota
CAT
Met
>WENV182424374
OIHE01009080
411543
Bacteroidota
CTG
Gln
>WENV182424358
OIHE01005342
59689
Bacteroidota
CAG
Leu
>WENV182424195
OIHE01000059
436206
Bacteroidota
TTG
Gln
>WENV182424165
OIHE01000012
436206
Bacteroidota
TTG
Gln
>WENV182424361
OIHE01006044
20893
Bacteroidota
GGA
Ser
>WENV182424209
OIHE01000127
338124
Bacteroidota
CCG
Arg
>WENV182424350
OIHE01004485
235203
Bacteroidota
TTT
Lys
>WENV182424297
OIHE01001172
238121
Bacteroidota
CTT
Lys
>WENV182424305
OIHE01001405
338132
Bacteroidota
GCA
Cys
>WENV182424212
OIHE01000134
338132
Bacteroidota
GCA
Cys
>WENV182424298
OIHE01001172
45423
Bacteroidota
TGA
Ser
>WENV182424173
OIHE01000022
193809
Bacteroidota
CAT
Met
>WENV182424326
OIHE01003146
58714
Bacteroidota
CAA
Leu
>WENV182424375
OIHE01009404
144933
Bacteroidota
TCT
Arg
>WENV182424196
OIHE01000062
141414
Bacteroidota
GGG
Pro
>WENV182424158
OIHE01000003
141414
Bacteroidota
GGG
Pro
>WENV182424203
OIHE01000107
144656
Bacteroidota
GTG
His
>WENV182424187
OIHE01000042
235207
Bacteroidota
CAT
Met
>WENV182424343
OIHE01004220
144659
Bacteroidota
GTG
His
>WENV182424309
OIHE01001545
235180
Bacteroidota
CCA
Trp
>WENV182424244
OIHE01000229
144596
Bacteroidota
GGC
Ala
>WENV182424276
OIHE01000489
80607
Bacteroidota
GTA
Tyr
>WENV182424228
OIHE01000164
80607
Bacteroidota
GTA
Tyr
>WENV182424283
OIHE01000534
144590
Bacteroidota
GTT
Asn
>WENV182424282
OIHE01000534
144590
Bacteroidota
GTT
Asn
>WENV182424175
OIHE01000024
95559
Bacteroidota
TAG
Leu
>WENV182424188
OIHE01000043
144655
Bacteroidota
GGC
Ala
>WENV182424308
OIHE01001526
338164
Bacteroidota
TTC
Glu
>WENV182424307
OIHE01001526
338164
Bacteroidota
TTC
Glu
>WENV182424315
OIHE01001745
95875
Bacteroidota
TAG
Leu
>WENV182424342
OIHE01004156
338314
Bacteroidota
CCT
Arg
>WENV182424300
OIHE01001227
240012
Bacteroidota
CCC
Gly
>WENV182424186
OIHE01000038
44852
Bacteroidota
TAA
Leu
>WENV182424325
OIHE01002745
147439
Bacteroidota
TCT
Arg
>WENV182424365
OIHE01006623
411550
Bacteroidota
CTG
Gln
>WENV182424171
OIHE01000019
19528
Bacteroidota
GGA
Ser
>WENV182424245
OIHE01000230
425638
Bacteroidota
CTG
Gln
>WENV182424225
OIHE01000151
425638
Bacteroidota
CTG
Gln
>WENV182424301
OIHE01001321
23696
Bacteroidota
GCT
Ser
>WENV182424156
OIHE01000001
23696
Bacteroidota
GCT
Ser
>WENV182424243
OIHE01000228
56823
Bacteroidota
TGA
Ser
>WENV182424210
OIHE01000129
56823
Bacteroidota
TGA
Ser
>WENV182424204
OIHE01000107
16224
Bacteroidota
GGA
Ser
>WENV182424160
OIHE01000003
16220
Bacteroidota
GGA
Ser
>WENV182424193
OIHE01000052
338125
Bacteroidota
CCT
Arg
>WENV182424176
OIHE01000028
338125
Bacteroidota
CCT
Arg
>WENV182424319
OIHE01001858
235129
Bacteroidota
GCC
Gly
>WENV182424317
OIHE01001858
235129
Bacteroidota
GCC
Gly
>WENV182424294
OIHE01000913
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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