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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182427021
OIHT01000033
280532
Bacteroidota
>WENV182427043
OIHT01000095
280557
Bacteroidota
CAT
Met
>WENV182427045
OIHT01000100
280557
Bacteroidota
CAT
Met
>WENV182427053
OIHT01000123
175936
Bacteroidota
CAT
Met
>WENV182427052
OIHT01000119
398828
Bacteroidota
CCG
Arg
>WENV182427060
OIHT01000136
398829
Bacteroidota
CCT
Arg
>WENV182427010
OIHT01000009
399026
Bacteroidota
CCT
Arg
>WENV182427122
OIHT01001918
280451
Bacteroidota
CGT
Thr
>WENV182427008
OIHT01000006
398860
Bacteroidota
CTC
Glu
>WENV182427032
OIHT01000072
480318
Bacteroidota
CTG
Gln
>WENV182427033
OIHT01000079
398836
Bacteroidota
GCA
Cys
>WENV182427041
OIHT01000088
398836
Bacteroidota
GCA
Cys
>WENV182427057
OIHT01000130
20206
Bacteroidota
GGA
Ser
>WENV182427000
OIHT01000001
20766
Bacteroidota
GGA
Ser
>WENV182427105
OIHT01001094
175902
Bacteroidota
GGC
Ala
>WENV182427030
OIHT01000058
175844
Bacteroidota
GGC
Ala
>WENV182427059
OIHT01000134
99847
Bacteroidota
GTA
Tyr
>WENV182427051
OIHT01000118
175903
Bacteroidota
GTG
His
>WENV182427042
OIHT01000093
117741
Bacteroidota
TAG
Leu
>WENV182427001
OIHT01000002
117804
Bacteroidota
TAG
Leu
>WENV182427056
OIHT01000128
176192
Bacteroidota
TCT
Arg
>WENV182427047
OIHT01000103
56493
Bacteroidota
TGA
Ser
>WENV182427020
OIHT01000032
57807
Bacteroidota
TGA
Ser
>WENV182427062
OIHT01000154
57807
Bacteroidota
TGA
Ser
>WENV182427050
OIHT01000112
480404
Bacteroidota
TTG
Gln
>WENV182427117
OIHT01001670
484496
Bacteroidota
TTG
Gln
>WENV182427017
OIHT01000024
280446
Bacteroidota
TTT
Lys
>WENV182427048
OIHT01000106
280446
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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