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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182431331
OIII01000085
117741
Bacteroidota
TAG
Leu
>WENV182431346
OIII01000115
398829
Bacteroidota
CCT
Arg
>WENV182431360
OIII01000229
175838
Bacteroidota
GTT
Asn
>WENV182431310
OIII01000030
280557
Bacteroidota
CAT
Met
>WENV182431333
OIII01000094
280557
Bacteroidota
CAT
Met
>WENV182431529
OIII01008021
20492
Bacteroidota
GGA
Ser
>WENV182431307
OIII01000021
20206
Bacteroidota
GGA
Ser
>WENV182431293
OIII01000012
56493
Bacteroidota
TGA
Ser
>WENV182431324
OIII01000070
56493
Bacteroidota
TGA
Ser
>WENV182431422
OIII01001181
175903
Bacteroidota
GTG
His
>WENV182431288
OIII01000005
182267
Bacteroidota
GTT
Asn
>WENV182431287
OIII01000005
56072
Bacteroidota
TAA
Leu
>WENV182431416
OIII01000952
57807
Bacteroidota
TGA
Ser
>WENV182431344
OIII01000113
175902
Bacteroidota
GGC
Ala
>WENV182431356
OIII01000203
280451
Bacteroidota
CGT
Thr
>WENV182431419
OIII01001014
99847
Bacteroidota
GTA
Tyr
>WENV182431551
OIII01010249
186874
Bacteroidota
CAT
Met
>WENV182431592
OIII01017748
178179
Bacteroidota
GGC
Ala
>WENV182431306
OIII01000021
488746
Bacteroidota
CTG
Gln
>WENV182431572
OIII01014716
175844
Bacteroidota
GGC
Ala
>WENV182431311
OIII01000031
158068
Bacteroidota
GGG
Pro
>WENV182431401
OIII01000602
158068
Bacteroidota
GGG
Pro
>WENV182431330
OIII01000082
398828
Bacteroidota
CCG
Arg
>WENV182431454
OIII01002404
159415
Bacteroidota
TAC
Val
>WENV182431607
OIII01022880
176192
Bacteroidota
TCT
Arg
>WENV182431492
OIII01003947
280446
Bacteroidota
TTT
Lys
>WENV182431414
OIII01000929
484496
Bacteroidota
TTG
Gln
>WENV182431336
OIII01000098
398836
Bacteroidota
GCA
Cys
>WENV182431374
OIII01000294
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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