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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182439614
OIJU01000148
144688
Bacteroidota
CAT
Met
>WENV182439615
OIJU01000188
436206
Bacteroidota
TTG
Gln
>WENV182439617
OIJU01000341
80607
Bacteroidota
GTA
Tyr
>WENV182439618
OIJU01000341
338165
Bacteroidota
GGT
Thr
>WENV182439623
OIJU01000797
139743
Bacteroidota
GGG
Pro
>WENV182439624
OIJU01000839
95618
Bacteroidota
TAG
Leu
>WENV182439626
OIJU01001085
144933
Bacteroidota
TCT
Arg
>WENV182439627
OIJU01001577
144656
Bacteroidota
GTG
His
>WENV182439629
OIJU01001647
338314
Bacteroidota
CCT
Arg
>WENV182439640
OIJU01002492
235097
Bacteroidota
TTT
Lys
>WENV182439641
OIJU01002545
338132
Bacteroidota
GCA
Cys
>WENV182439644
OIJU01002900
16220
Bacteroidota
GGA
Ser
>WENV182439647
OIJU01003285
55270
Bacteroidota
TGA
Ser
>WENV182439659
OIJU01006297
411543
Bacteroidota
CTG
Gln
>WENV182439660
OIJU01006881
235207
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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