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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182443017
OIKJ01000001
398828
Bacteroidota
CCG
Arg
>WENV182443019
OIKJ01000006
484496
Bacteroidota
TTG
Gln
>WENV182443023
OIKJ01000007
175902
Bacteroidota
GGC
Ala
>WENV182443024
OIKJ01000009
351598
Bacteroidota
CGG
Pro
>WENV182443028
OIKJ01000013
99847
Bacteroidota
GTA
Tyr
>WENV182443030
OIKJ01000016
117741
Bacteroidota
TAG
Leu
>WENV182443031
OIKJ01000017
20206
Bacteroidota
GGA
Ser
>WENV182443034
OIKJ01000028
280446
Bacteroidota
TTT
Lys
>WENV182443036
OIKJ01000030
398836
Bacteroidota
GCA
Cys
>WENV182443037
OIKJ01000032
175838
Bacteroidota
GTT
Asn
>WENV182443038
OIKJ01000032
175838
Bacteroidota
GTT
Asn
>WENV182443040
OIKJ01000032
99847
Bacteroidota
GTA
Tyr
>WENV182443043
OIKJ01000039
488746
Bacteroidota
CTG
Gln
>WENV182443044
OIKJ01000039
158068
Bacteroidota
GGG
Pro
>WENV182443046
OIKJ01000047
280557
Bacteroidota
CAT
Met
>WENV182443048
OIKJ01000049
140771
Bacteroidota
>WENV182443054
OIKJ01000076
280451
Bacteroidota
CGT
Thr
>WENV182443055
OIKJ01000078
56493
Bacteroidota
TGA
Ser
>WENV182443057
OIKJ01000083
175903
Bacteroidota
GTG
His
>WENV182443059
OIKJ01000106
57807
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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