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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182479187
OIQS01000004
338124
Bacteroidota
CCG
Arg
>WENV182479188
OIQS01000005
235097
Bacteroidota
TTT
Lys
>WENV182479193
OIQS01000010
419272
Bacteroidota
CTG
Gln
>WENV182479194
OIQS01000010
16220
Bacteroidota
GGA
Ser
>WENV182479195
OIQS01000010
132360
Bacteroidota
GGG
Pro
>WENV182479197
OIQS01000011
52358
Bacteroidota
TGA
Ser
>WENV182479198
OIQS01000011
144656
Bacteroidota
GTG
His
>WENV182479199
OIQS01000011
16224
Bacteroidota
GGA
Ser
>WENV182479201
OIQS01000014
415410
Bacteroidota
TTG
Gln
>WENV182479202
OIQS01000016
415410
Bacteroidota
TTG
Gln
>WENV182479203
OIQS01000017
80607
Bacteroidota
GTA
Tyr
>WENV182479204
OIQS01000018
235102
Bacteroidota
CGT
Thr
>WENV182479205
OIQS01000019
338132
Bacteroidota
GCA
Cys
>WENV182479209
OIQS01000026
19528
Bacteroidota
GGA
Ser
>WENV182479211
OIQS01000034
338125
Bacteroidota
CCT
Arg
>WENV182479213
OIQS01000035
235207
Bacteroidota
CAT
Met
>WENV182479214
OIQS01000040
52358
Bacteroidota
TGA
Ser
>WENV182479227
OIQS01000064
144590
Bacteroidota
GTT
Asn
>WENV182479228
OIQS01000064
144590
Bacteroidota
GTT
Asn
>WENV182479231
OIQS01000075
144655
Bacteroidota
GGC
Ala
>WENV182479234
OIQS01000088
95559
Bacteroidota
TAG
Leu
>WENV182479235
OIQS01000090
338132
Bacteroidota
GCA
Cys
>WENV182479241
OIQS01000109
338486
Bacteroidota
CAT
Met
>WENV182479242
OIQS01000114
23696
Bacteroidota
GCT
Ser
>WENV182479245
OIQS01000135
147439
Bacteroidota
TCT
Arg
>WENV182479247
OIQS01000144
338132
Bacteroidota
GCA
Cys
>WENV182479249
OIQS01000145
425638
Bacteroidota
CTG
Gln
>WENV182479259
OIQS01000218
132360
Bacteroidota
GGG
Pro
>WENV182479260
OIQS01000239
338486
Bacteroidota
CAT
Met
>WENV182479267
OIQS01000293
46165
Bacteroidota
TGA
Ser
>WENV182479268
OIQS01000293
238121
Bacteroidota
CTT
Lys
>WENV182479269
OIQS01000293
45423
Bacteroidota
TGA
Ser
>WENV182479294
OIQS01000468
80614
Bacteroidota
>WENV182479297
OIQS01000493
95875
Bacteroidota
TAG
Leu
>WENV182479310
OIQS01000566
411629
Bacteroidota
TTG
Gln
>WENV182479316
OIQS01000845
411550
Bacteroidota
CTG
Gln
>WENV182479317
OIQS01000845
411550
Bacteroidota
CTG
Gln
>WENV182479319
OIQS01000890
144659
Bacteroidota
GTG
His
>WENV182479320
OIQS01000901
338125
Bacteroidota
CCT
Arg
>WENV182479321
OIQS01000906
338164
Bacteroidota
TTC
Glu
>WENV182479322
OIQS01000906
338164
Bacteroidota
TTC
Glu
>WENV182479323
OIQS01000906
343138
Bacteroidota
CCT
Arg
>WENV182479332
OIQS01001033
144657
Bacteroidota
CGG
Pro
>WENV182479333
OIQS01001033
235180
Bacteroidota
CCA
Trp
>WENV182479339
OIQS01001224
235182
Bacteroidota
>WENV182479340
OIQS01001348
411543
Bacteroidota
CTG
Gln
>WENV182479342
OIQS01001367
58714
Bacteroidota
CAA
Leu
>WENV182479343
OIQS01001375
181746
Bacteroidota
GGC
Ala
>WENV182479348
OIQS01001542
59689
Bacteroidota
CAG
Leu
>WENV182479351
OIQS01001637
235203
Bacteroidota
TTT
Lys
>WENV182479353
OIQS01001855
95618
Bacteroidota
TAG
Leu
>WENV182479359
OIQS01002040
144688
Bacteroidota
CAT
Met
>WENV182479360
OIQS01002048
240012
Bacteroidota
CCC
Gly
>WENV182479364
OIQS01002450
185921
Bacteroidota
GTC
Asp
>WENV182479365
OIQS01002450
185921
Bacteroidota
GTC
Asp
>WENV182479366
OIQS01002639
58715
Bacteroidota
GAG
Leu
>WENV182479368
OIQS01003086
338132
Bacteroidota
GCA
Cys
>WENV182479379
OIQS01003891
23696
Bacteroidota
GCT
Ser
>WENV182479388
OIQS01005707
338314
Bacteroidota
CCT
Arg
>WENV182479391
OIQS01007024
126641
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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