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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182479566
OIQU01000001
365112
Bacteroidota
TTT
Lys
>WENV182479568
OIQU01000003
29791
Bacteroidota
GCT
Ser
>WENV182479569
OIQU01000003
398860
Bacteroidota
CTC
Glu
>WENV182479573
OIQU01000005
172207
Bacteroidota
GGG
Pro
>WENV182479572
OIQU01000005
20206
Bacteroidota
GGA
Ser
>WENV182479571
OIQU01000005
488746
Bacteroidota
CTG
Gln
>WENV182479575
OIQU01000009
117741
Bacteroidota
TAG
Leu
>WENV182479576
OIQU01000011
175844
Bacteroidota
GGC
Ala
>WENV182479579
OIQU01000020
484496
Bacteroidota
TTG
Gln
>WENV182479589
OIQU01000034
398836
Bacteroidota
GCA
Cys
>WENV182479597
OIQU01000038
56072
Bacteroidota
TAA
Leu
>WENV182479600
OIQU01000045
280557
Bacteroidota
CAT
Met
>WENV182479601
OIQU01000049
398829
Bacteroidota
CCT
Arg
>WENV182479602
OIQU01000050
175902
Bacteroidota
GGC
Ala
>WENV182479611
OIQU01000066
484496
Bacteroidota
TTG
Gln
>WENV182479624
OIQU01000119
175903
Bacteroidota
GTG
His
>WENV182479625
OIQU01000119
27502
Bacteroidota
GGA
Ser
>WENV182479628
OIQU01000136
398828
Bacteroidota
CCG
Arg
>WENV182479629
OIQU01000137
69204
Bacteroidota
TGA
Ser
>WENV182479647
OIQU01000174
172207
Bacteroidota
GGG
Pro
>WENV182479648
OIQU01000185
99847
Bacteroidota
GTA
Tyr
>WENV182479653
OIQU01000210
365112
Bacteroidota
TTT
Lys
>WENV182479661
OIQU01000233
99847
Bacteroidota
GTA
Tyr
>WENV182479667
OIQU01000253
69204
Bacteroidota
TGA
Ser
>WENV182479687
OIQU01000404
404226
Bacteroidota
CCT
Arg
>WENV182479688
OIQU01000404
398871
Bacteroidota
TTC
Glu
>WENV182479700
OIQU01000529
175838
Bacteroidota
GTT
Asn
>WENV182479701
OIQU01000529
175838
Bacteroidota
GTT
Asn
>WENV182479702
OIQU01000535
280553
Bacteroidota
TTT
Lys
>WENV182479703
OIQU01000542
399200
Bacteroidota
CAT
Met
>WENV182479705
OIQU01000612
118089
Bacteroidota
TAG
Leu
>WENV182479709
OIQU01000672
74084
Bacteroidota
CAG
Leu
>WENV182479710
OIQU01000729
280530
Bacteroidota
CCA
Trp
>WENV182479714
OIQU01000944
280451
Bacteroidota
CGT
Thr
>WENV182479724
OIQU01001270
280478
Bacteroidota
GCC
Gly
>WENV182479733
OIQU01001590
20449
Bacteroidota
GGA
Ser
>WENV182479743
OIQU01002034
285750
Bacteroidota
CCC
Gly
>WENV182479747
OIQU01002257
175906
Bacteroidota
GTG
His
>WENV182479748
OIQU01002680
480404
Bacteroidota
TTG
Gln
>WENV182479751
OIQU01003259
117804
Bacteroidota
TAG
Leu
>WENV182479752
OIQU01003304
175936
Bacteroidota
CAT
Met
>WENV182479755
OIQU01003471
399026
Bacteroidota
CCT
Arg
>WENV182479763
OIQU01004794
73011
Bacteroidota
CAA
Leu
>WENV182479785
OIQU01006666
178907
Bacteroidota
TCT
Arg
>WENV182479793
OIQU01008817
280532
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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