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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182500983
OIUA01001952
243025
Bacteroidota
CAT
Met
>WENV182500938
OIUA01000786
343138
Bacteroidota
CCT
Arg
>WENV182501158
OIUA01022374
436206
Bacteroidota
TTG
Gln
>WENV182501110
OIUA01009997
338132
Bacteroidota
GCA
Cys
>WENV182500895
OIUA01000396
301449
Bacteroidota
CGG
Pro
>WENV182500988
OIUA01002123
144933
Bacteroidota
TCT
Arg
>WENV182501161
OIUA01024352
235207
Bacteroidota
CAT
Met
>WENV182501035
OIUA01004782
143169
Bacteroidota
GGG
Pro
>WENV182500908
OIUA01000534
80607
Bacteroidota
GTA
Tyr
>WENV182501092
OIUA01008493
154643
Bacteroidota
CAT
Met
>WENV182501066
OIUA01007091
425638
Bacteroidota
CTG
Gln
>WENV182501120
OIUA01011387
353927
Bacteroidota
TTC
Glu
>WENV182501172
OIUA01028507
23696
Bacteroidota
GCT
Ser
>WENV182500966
OIUA01001407
414426
Bacteroidota
CTG
Gln
>WENV182500939
OIUA01000808
16224
Bacteroidota
GGA
Ser
>WENV182500957
OIUA01001174
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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