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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182550356
OJCA01000452
236929
Bacteroidota
TTT
Lys
>WENV182550397
OJCA01001218
306609
Bacteroidota
GAA
Phe
>WENV182550349
OJCA01000383
308806
Bacteroidota
TCC
Gly
>WENV182550310
OJCA01000120
163866
Bacteroidota
TCG
Arg
>WENV182550451
OJCA01003023
238765
Bacteroidota
GCC
Gly
>WENV182550486
OJCA01004422
126691
Bacteroidota
TGG
Pro
>WENV182550382
OJCA01000883
309582
Bacteroidota
TTT
Lys
>WENV182550468
OJCA01003591
172532
Bacteroidota
GTC
Asp
>WENV182550353
OJCA01000407
338625
Bacteroidota
TTC
Glu
>WENV182550521
OJCA01006958
161616
Bacteroidota
CAT
Met
>WENV182550435
OJCA01002386
127414
Bacteroidota
TGG
Pro
>WENV182550731
OJCA01035475
44938
Bacteroidota
TGA
Ser
>WENV182550305
OJCA01000075
290994
Bacteroidota
CAT
Met
>WENV182550332
OJCA01000245
341187
Bacteroidota
TTG
Gln
>WENV182550371
OJCA01000755
21340
Bacteroidota
GGA
Ser
>WENV182550495
OJCA01004873
347866
Bacteroidota
TTC
Glu
>WENV182550474
OJCA01003771
49675
Bacteroidota
TGA
Ser
>WENV182550606
OJCA01015606
127449
Bacteroidota
TAC
Val
>WENV182550624
OJCA01017232
179613
Bacteroidota
CAT
Met
>WENV182550348
OJCA01000383
101289
Bacteroidota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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